Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq106 183 3e-41 >seq106 Length=79482 Score = 183 bits (202), Expect = 3e-41 Identities = 480/726 (66%), Gaps = 15/726 (2%) Strand=Plus/Plus Query 15913 TTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTC 15972 ||| ||||| || || ||||| |||||||| || || || | | ||| || | || Sbjct 37103 TTGATAATCGGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATGTC 37162 Query 15973 CATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAACT 16030 |||||| ||||| ||||||||||| || |||| | | || |||| || | | Sbjct 37163 CATAAAGTCAAATGGATTAGTAGCCATGTAAATCTTGTCGA--ACCCAAGAGCAACCATG 37220 Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090 | | ||| || || ||||| || ||||||||||| ||| | |||| || || || || Sbjct 37221 AGACGATCAGCAACGAATTCAATGTATTGACACATCAAGGCAGAATTCATGCCAATGAGA 37280 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 || |||||||| | || ||||||| |||||| || || ||||| |||||| Sbjct 37281 GCAACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATA 37340 Query 16151 TCGGTG----GCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGC 16206 || || | || || | |||| | || | ||||| |||| | ||||| || Sbjct 37341 TCCTTGACGCGTTCTTGGCTAGGACGCT-TACG---AAGGTGGGTAAATAAAAGACAAGC 37396 Query 16207 GAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGG 16266 ||||| ||| || ||||| || | | ||| | ||| ||| || || || || || Sbjct 37397 AAAGTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGG 37456 Query 16267 CATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACC 16326 ||| || |||||||| | ||| || || | |||||| || || || ||||| ||||| Sbjct 37457 CATCAAACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACC 37516 Query 16327 CTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCA 16386 || |||| ||||| || | | || || || | | | | | || | | |||||| Sbjct 37517 TTCGACAGCAGCAAAGGCAACAAGGCGCTCAGCAAAGGAACCGT-TTGAGGA--AATCCA 37573 Query 16387 TTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA 16446 || |||| || || ||| || |||||| || || || || || ||| | Sbjct 37574 CTTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAG 37633 Query 16447 TTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGA 16506 | ||||| || || |||| | ||||| || ||||||| | |||||| |||||| Sbjct 37634 CATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGC 37693 Query 16507 GTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTAC 16566 ||| ||||| || || || ||||| |||||||| ||| ||| || | || | || Sbjct 37694 GTGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGAC 37753 Query 16567 TTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAA 16626 ||| | |||| || ||| ||| ||||| || || || || ||||||| || Sbjct 37754 TTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAA 37813 Query 16627 CGCCAA 16632 ||||| Sbjct 37814 GGCCAA 37819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511410820099200