Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq59 107 2e-18 >seq59 Length=120760 Score = 107 bits (118), Expect = 2e-18 Identities = 283/431 (66%), Gaps = 27/431 (6%) Strand=Plus/Minus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || |||||||| || ||||||| || || |||||||| ||||| || | || ||| Sbjct 8977 GGTGACCTTGGACCAGTTTACGGATTTCAATGGAGACACTTTGGCGCCAAGTACGTTGAC 8918 Query 18849 TGTCAATCAAACTATTTACAG--CAAGGAATCGATCAGCTGCAAACTGTTATAGATACAA 18906 ||| | | | ||| |||| ||||| | ||||| | ||| || || ||||| | Sbjct 8917 TGTGACACTGATTAT--ACAGGACAAGGCGTTGATCAATTACAACAAGTGATTGATACTA 8860 Query 18907 TTAAAA-CAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATC 18965 | |||| ||| |||| | | | |||| ||| |||| | ||||| || ||||| Sbjct 8859 TAAAAAACAATCCCACTGATCGCA-GAATCATTCTATCAGCATGGAACCCTGCAGATATT 8801 Query 18966 CCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACG----- 19020 || | |||| |||| || ||||| | || ||||||||||| || | ||| Sbjct 8800 CCTATCATGGCTTTACCACCTTGTCATGCCTTTTGTCAGTTTTATGTATCTAACCCACCT 8741 Query 19021 -------------GTG---AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGC 19064 ||| | |||||||| | || || | || | |||||||| Sbjct 8740 CAGGATGGCGGGCGTGCCAAGTTATCCTGTGTGCTCTATCAACGTTCTTGCGATATGGGA 8681 Query 19065 CTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTT 19124 || || || || ||||| |||||| ||||||||| | || ||| | || ||||| Sbjct 8680 CTGGGTGTTCCTTTCAATATTGCTTCTTATGCACTTTTGACACGCATGATTGCACATGTA 8621 Query 19125 ACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAAT 19184 |||| ||| || | || || || || ||||||||||| ||| ||||| |||| || || Sbjct 8620 ACAGATCTTGAACCTGGTGAATTCATACATACAATGGGCGATACACATGTTTATGTGGAT 8561 Query 19185 CATATAGATGC 19195 ||| | || || Sbjct 8560 CATCTTGACGC 8550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399501273385200