Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208
3745.1_202017-04-12] 560 sequences; 24,950,816 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq59 176 3e-39
>seq59
Length=120760
Score = 176 bits (194), Expect = 3e-39
Identities = 453/686 (66%), Gaps = 33/686 (5%)
Strand=Plus/Plus
Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737
|| || || |||| ||||| ||||| | || | ||| || || ||||| || || ||
Sbjct 8544 TTGAGTGCGTCAAGATGATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCA 8603
Query 101738 CCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATG 101797
||||| | |||| || ||||| |||||||||| || ||||| | ||| ||||||
Sbjct 8604 CCAGGTTCAAGATCTGTTACATGTGCAATCATGCGTGTCAAAAGTGCATAAGAAGCAATA 8663
Query 101798 TTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTT 101857
|| || || || || | |||||||| || | |||||| || |||||| | |||
Sbjct 8664 TTGAAAGGAACACCCAGTCCCATATCGCAAGAACGTTGATAGAGCACACAGGATAACTTG 8723
Query 101858 ---------CCATC------------ACAGACATAAAATTGACTTAATACATGACAAGGC 101896
||||| | | |||||||| |||| || ||||||||||
Sbjct 8724 GCACGCCCGCCATCCTGAGGTGGGTTAGATACATAAAACTGACAAAAGGCATGACAAGGT 8783
Query 101897 GGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCT 101956
|| || |||| ||||||| |||| | ||||| || | | | || || | |||
Sbjct 8784 GGTAAAGCCATGATAGGAATATCTGCAGGGTTCCATGCTGATAGAATGATTCTGCGATCA 8843
Query 101957 GTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTA 102016
|| || || |||||||||||||||||| |||| |||||| ||||| |||| |||| ||
Sbjct 8844 GTGGGATTGTTTTTTATAGTATCAATCACTTGTTGTAATTGATCAACGCCTTGTCCTGTA 8903
Query 102017 TAATC-GCGCCCAACA-CCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACA 102074
||||| | | | ||| | || | || || || || ||||| |||||||| || |
Sbjct 8904 TAATCAGTGTC--ACAGTCAACGTACTTGGCGCCAAAGTGTCTCCATTGAAATCCGTAAA 8961
Query 102075 CAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAG 102134
| |||||||| || |||||| | || | || ||| | || || | | || | ||
Sbjct 8962 CTGGTCCAAGGTCACCTTCACGACGGTGAGTAAGACCTAACTTGTCGAGATATTCGCGAG 9021
Query 102135 ATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCT-CTTTGCTGTCAGTAGAT 102193
| || || |||||||||| | | | | ||| | ||||| || ||| |
Sbjct 9022 AACCGTTGCCATCCCAAATTTTGATATTTCTTTCACTTAGATGCTTTG-AGTTTGTATCT 9080
Query 102194 CCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTT 102253
||| | || ||||| | ||||||||| | || || || | ||||| | ||| || ||
Sbjct 9081 CCTTTTATGAACCAAAGCAGTTCTTCCAAGACTCCCCTGAAGAATACACGCTTTGTTGTC 9140
Query 102254 AAAAGTGGAAAT---TCATTTTCTAAACTAAACCTAGACT---GTGTTCCAAAAATACTC 102307
| || |||||| |||| || |||| || | | || | | |||||| | |
Sbjct 9141 AGGAGGGGAAATATATCATCTTTTAAAGAGAATCGAAGCTGAGGAGGAGCAAAAACAGCC 9200
Query 102308 AGTGTTCCAGTCCCTGTTCTGTCATT 102333
| |||||| || ||||||| ||| ||
Sbjct 9201 AATGTTCCTGTACCTGTTCGGTCCTT 9226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361248734460560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |