Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq59 176 3e-39 >seq59 Length=120760 Score = 176 bits (194), Expect = 3e-39 Identities = 453/686 (66%), Gaps = 33/686 (5%) Strand=Plus/Plus Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737 || || || |||| ||||| ||||| | || | ||| || || ||||| || || || Sbjct 8544 TTGAGTGCGTCAAGATGATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCA 8603 Query 101738 CCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATG 101797 ||||| | |||| || ||||| |||||||||| || ||||| | ||| |||||| Sbjct 8604 CCAGGTTCAAGATCTGTTACATGTGCAATCATGCGTGTCAAAAGTGCATAAGAAGCAATA 8663 Query 101798 TTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTT 101857 || || || || || | |||||||| || | |||||| || |||||| | ||| Sbjct 8664 TTGAAAGGAACACCCAGTCCCATATCGCAAGAACGTTGATAGAGCACACAGGATAACTTG 8723 Query 101858 ---------CCATC------------ACAGACATAAAATTGACTTAATACATGACAAGGC 101896 ||||| | | |||||||| |||| || |||||||||| Sbjct 8724 GCACGCCCGCCATCCTGAGGTGGGTTAGATACATAAAACTGACAAAAGGCATGACAAGGT 8783 Query 101897 GGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCT 101956 || || |||| ||||||| |||| | ||||| || | | | || || | ||| Sbjct 8784 GGTAAAGCCATGATAGGAATATCTGCAGGGTTCCATGCTGATAGAATGATTCTGCGATCA 8843 Query 101957 GTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTA 102016 || || || |||||||||||||||||| |||| |||||| ||||| |||| |||| || Sbjct 8844 GTGGGATTGTTTTTTATAGTATCAATCACTTGTTGTAATTGATCAACGCCTTGTCCTGTA 8903 Query 102017 TAATC-GCGCCCAACA-CCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACA 102074 ||||| | | | ||| | || | || || || || ||||| |||||||| || | Sbjct 8904 TAATCAGTGTC--ACAGTCAACGTACTTGGCGCCAAAGTGTCTCCATTGAAATCCGTAAA 8961 Query 102075 CAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAG 102134 | |||||||| || |||||| | || | || ||| | || || | | || | || Sbjct 8962 CTGGTCCAAGGTCACCTTCACGACGGTGAGTAAGACCTAACTTGTCGAGATATTCGCGAG 9021 Query 102135 ATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCT-CTTTGCTGTCAGTAGAT 102193 | || || |||||||||| | | | | ||| | ||||| || ||| | Sbjct 9022 AACCGTTGCCATCCCAAATTTTGATATTTCTTTCACTTAGATGCTTTG-AGTTTGTATCT 9080 Query 102194 CCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTT 102253 ||| | || ||||| | ||||||||| | || || || | ||||| | ||| || || Sbjct 9081 CCTTTTATGAACCAAAGCAGTTCTTCCAAGACTCCCCTGAAGAATACACGCTTTGTTGTC 9140 Query 102254 AAAAGTGGAAAT---TCATTTTCTAAACTAAACCTAGACT---GTGTTCCAAAAATACTC 102307 | || |||||| |||| || |||| || | | || | | |||||| | | Sbjct 9141 AGGAGGGGAAATATATCATCTTTTAAAGAGAATCGAAGCTGAGGAGGAGCAAAAACAGCC 9200 Query 102308 AGTGTTCCAGTCCCTGTTCTGTCATT 102333 | |||||| || ||||||| ||| || Sbjct 9201 AATGTTCCTGTACCTGTTCGGTCCTT 9226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361248734460560