Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq59 159 2e-34 >seq59 Length=120760 Score = 159 bits (176), Expect = 2e-34 Identities = 430/654 (66%), Gaps = 29/654 (4%) Strand=Plus/Plus Query 97000 TTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGT--AAGCTGCTCTGTGAGAGCATCAATGT 97057 |||| || ||||||||| |||| ||| ||| || || | |||| || |||| | Sbjct 8502 TTTAAAGTAGGGAAAGGCTTGGG--TTCACGTTGAACTTGTTGCTTGAGTGCGTCAAGAT 8559 Query 97058 GATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAG 97117 ||| |||||||| || | ||| || | || || || ||||| ||||| | | ||| | Sbjct 8560 GATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCACCAGGTTCAAGATCTG 8619 Query 97118 TGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTA 97177 | ||||| || ||||| | || || || | ||| |||||| || ||||| || || | Sbjct 8620 TTACATGTGCAATCATGCGTGTCAAAAGTGCATAAGAAGCAATATTGAAAGGAACACCCA 8679 Query 97178 GTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTT---------CCATC-- 97226 |||||||||| || | |||||| | | |||||| | ||| ||||| Sbjct 8680 GTCCCATATCGCAAGAACGTTGATAGAGCACACAGGATAACTTGGCACGCCCGCCATCCT 8739 Query 97227 ----------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTG 97276 | | ||||||||||||| || ||||||| || || || ||||| | | Sbjct 8740 GAGGTGGGTTAGATACATAAAACTGACAAAAGGCATGACAAGGTGGTAAAGCCATGATAG 8799 Query 97277 GAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTA 97336 ||| |||| ||||| || | | | ||||| | ||| || || || | | || Sbjct 8800 GAATATCTGCAGGGTTCCATGCTGATAGAATGATTCTGCGATCAGTGGGATTGTTTTTTA 8859 Query 97337 TGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAAT-TGTGCTTAAGA 97395 | |||| ||| | || | ||||||||||||||||| ||| ||||| ||| || Sbjct 8860 TAGTATCAATCACTTGTTGTAATTGATCAACGCCTTGTCCTGTATAATCAGTGTCACAGT 8919 Query 97396 CCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 | | || | || ||||| || |||||||| ||||| ||||| ||||||||||| ||| Sbjct 8920 CAACG-TACTTGGCGCCAAAGTGTCTCCATTGAAATCCGTAAACTGGTCCAAGGTCACCT 8978 Query 97456 TCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAA 97515 || | | | | ||| | ||| || | ||| | ||| || || |||||||| Sbjct 8979 TCACGACGGTGAGTAAGACCTAACTTGTCGAGATATTCGCGAGAACCGTTGCCATCCCAA 9038 Query 97516 ATGTGCACACCAGATGCTGCAAGCT-CTTTGCTGTCAGTAGATCCTCTGATAAACCACAA 97574 || | | | | | || | ||||| || ||| |||| | || ||||| | Sbjct 9039 ATTTTGATATTTCTTTCACTTAGATGCTTTG-AGTTTGTATCTCCTTTTATGAACCAAAG 9097 Query 97575 CAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 || |||||||| || || || | ||||| | ||| ||||| | ||| ||||| Sbjct 9098 CAGTTCTTCCAAGACTCCCCTGAAGAATACACGCTTTGTTGTCAGGAGGGGAAA 9151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346781633199200