Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq109 127 2e-24 seq11 116 3e-21 seq91 104 2e-17 >seq109 Length=78937 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||||| || ||||||||||| || ||||| | || || ||| ||| Sbjct 18312 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCTTCG 18371 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| ||||| |||||||||| || ||||| ||||| || || ||||||||| | Sbjct 18372 AGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 18431 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || |||||||| || | |||| ||||| | ||||| || | || | || || Sbjct 18432 ATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCGACTTCTAAAGTAATTGTCTTT 18491 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || ||||| || |||||| Sbjct 18492 CCAGTAAGTGTCTTGACAAAGATTTGCATG 18521 >seq11 Length=236632 Score = 116 bits (128), Expect = 3e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||||| |||||||| ||||||||||| |||| ||| || ||| ||| Sbjct 164 ACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCACTCAAAGTACGACCATCTTCG 105 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| | |||||||| || ||||| ||||| || || ||||||||| Sbjct 104 AGCTGCTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTGTCTTGG 45 Query 118650 ATTTTTTGTTTAACCTGTTCGA 118671 || ||||| || || | ||||| Sbjct 44 ATCTTTTGCTTGACATTTTCGA 23 >seq91 Length=92626 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||||| || ||||||||||||||||| |||| || || || ||| Sbjct 69980 ACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCG 70039 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| || ||| | |||||||| || ||||| ||||| || || ||||| ||| Sbjct 70040 AGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGG 70099 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCT 118684 || ||||| || || | || | |||||| | ||| Sbjct 70100 ATCTTTTGCTTGACATTGTCAATGGTGTCAGAGCT 70134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827439107520