Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq109 93.3 5e-14 seq287 89.7 6e-13 >seq109 Length=78937 Score = 93.3 bits (102), Expect = 5e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 60053 TATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 ||| ||||| |||| | ||| |||||| |||||| ||||| |||||||||||||||| Sbjct 6793 TATTAAAAAGAATCTCTTTGGCGGGGAATTGAACCCCGGTCTTCCGCGTGACAGGCGGAG 6734 Query 60113 ATACTCACCACTATACTACCGAGGAT 60138 ||||| |||||||||||||| | ||| Sbjct 6733 ATACTAACCACTATACTACCAAAGAT 6708 >seq287 Length=17202 Score = 89.7 bits (98), Expect = 6e-13 Identities = 80/99 (81%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 ||| | ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 6573 CTCTTTGGCGGGGAATTGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTAACCACTA 6514 Query 60126 TACTACCGAGGATTGAATAT-ATAACTTGAATATTACAA 60163 ||||||| | ||| | ||| | | ||| | ||||| || Sbjct 6513 TACTACCAAAGATCGCTTATGAGATCTTTAGTATTAAAA 6475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571813597276800