Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq59 183 2e-41 >seq59 Length=120760 Score = 183 bits (202), Expect = 2e-41 Identities = 404/602 (67%), Gaps = 33/602 (5%) Strand=Plus/Minus Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266 |||||| || || || | || || || || ||||||||||||||||| ||||| || Sbjct 8988 ACCGTCGTGAAGGTGACCTTGGACCAGTTTACGGATTTCAATGGAGACACTTTGGCGCCA 8929 Query 20267 AATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326 | || |||||| |||| ||||| |||||||| || |||||||||||| | || | Sbjct 8928 AGTACGTTGACTGTGACACTGATTATACAGGACAAGGCGTTGATCAATTACAACAAGTGA 8869 Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386 || || || |||| || || | || | ||||| ||| ||| || |||||| || Sbjct 8868 TTGATACTATAAAAAACAATCCCACTGATCGCAGAATCATTCTATCAGCATGGAACCCTG 8809 Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA 20446 |||| | ||| | |||||||| || || |||||| | || || ||||| || ||| Sbjct 8808 CAGATATTCCTATCATGGCTTTACCACCTTGTCATGCCTTTTGTCAGTTTTATGTATCTA 8749 Query 20447 A------TAATG---------------AATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485 | | | | | || || ||| | |||||||| || | Sbjct 8748 ACCCACCTCAGGATGGCGGGCGTGCCAAGTTATCCTGTGTGCTCTATCAACGTTCTTGCG 8689 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 ||||||||||||||||||||||||||||||| |||||| || | || ||||||| Sbjct 8688 ATATGGGACTGGGTGTTCCTTTCAATATTGCTTCTTATGCACTTTTGACACGCATGATTG 8629 Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605 ||||||| |||||| | || | ||||| || | || || || || || | ||| ||| Sbjct 8628 CACATGTAACAGATCTTGAACCTGGTGAATTCATACATACAATGGGCGATACACATGTTT 8569 Query 20606 ACCTTAATCATATAGAACCTTTAAAATTAC-AGTTAACACGACAACCAAAACAATTCCCA 20664 | | ||||| | || | | || || |||| | ||| |||| || | ||||| Sbjct 8568 ATGTGGATCATCTTGACGCACTCAAGCAACAAGTTCA-ACGTGAACCCAAGCCTTTCCCT 8510 Query 20665 ACTCTTCGCATTACTCGAACTGTTAA--AGATATTAACGAT--TTTAAAG-CTGATGATT 20719 ||| | | | || ||| || || ||||| || |||| ||| ||| ||| |||| Sbjct 8509 ACTTT----AAAAATC-AACCGTAAAGTAGATACTATCGATGATTTCAAGTTTGAAGATT 8455 Query 20720 TTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAATATA 20779 |||| ||||| || | ||| || | | ||| |||| |||||||||| ||||| | Sbjct 8454 TTGTATTAGAGAACTACAGTCCTCACAGTAAAATAGAAATGAAAATGTCTGTCTAATAAA 8395 Query 20780 TA 20781 || Sbjct 8394 TA 8393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399181275569200