Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq106 199 4e-46 >seq106 Length=79482 Score = 199 bits (220), Expect = 4e-46 Identities = 536/816 (66%), Gaps = 8/816 (1%) Strand=Plus/Plus Query 13934 TTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13993 |||||||||||||| || || |||| || || || | |||||||| ||||||||||| Sbjct 37122 TTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATGTCCATAAAGTCAAATGGATTA 37181 Query 13994 GTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCA 14053 || | ||| | | || || | || || | | | | | ||| |||| ||| ||| Sbjct 37182 GTAGCCATGTAAATCTTGTCGAACCCAAGAGCAACCATGAGACGATCAGCAACGAATTCA 37241 Query 14054 ATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTT 14113 || |||||| |||| || || ||||||| || || || || |||| || || Sbjct 37242 ATGTATTGACACATCAAGGCAGAATTCATGCCAATGAGAGCAACGGGAAGAGCATCCGTC 37301 Query 14114 AAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTCATTAGAA 14173 |||||||||| ||| || ||||| || || ||| | | | ||| | | Sbjct 37302 AAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATCCTTGACGCGTTCTTGGCTA 37361 Query 14174 GGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCT 14233 ||| | | || || |||| | | ||| ||||| ||| |||||| || ||||| Sbjct 37362 GGACGCTTACGAAGGTGGGTAAATAAAAGACAAGCAAAGTCAGTATGAAGACCTTCATCA 37421 Query 14234 CTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAA 14293 | || || | ||| || ||||| || || |||||||| || ||||| || | |||| Sbjct 37422 CGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAAACCACGTTTCTTGAGCCAA 37481 Query 14294 AATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAAT 14353 || || | ||| || || || || ||||| || || || || |||||||| || | | Sbjct 37482 AAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACAAGG 37541 Query 14354 CGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAttttttt 14413 || || |||| || | ||| | || ||||| || ||||| |||| ||| | Sbjct 37542 CGCTCAGCAAAGGAACCGTTTGAG---GAAATCCACTTGAAGGCCCAATCAGCCTTTCTC 37598 Query 14414 ttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAA 14473 || ||| || || || ||||||||| ||| | ||| ||||||| || | Sbjct 37599 TTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTTATCTTTG 37658 Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 || || || ||||| | | || || |||| | ||| |||||||| || || ||| Sbjct 37659 ATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATGTTTTCAATCATGATTTGA 37718 Query 14534 AAACCATAAAAACATCTAGCTTCTG-ACCATTGTACCTCTGAGTAAAATCTTTCGGCCAA 14592 || ||||| |||||| ||||||| | | ||| || || |||| ||| |||| Sbjct 37719 AAGCCATAGAAACATTTAGCTTCAGGAATCTTG-ACTTCATCACAAAAGTTTTGAACCAA 37777 Query 14593 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14652 ||||||||||| || ||||| | | ||||| || ||||| | |||||| | Sbjct 37778 GTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCAAGACACGAGAGATAAAGAA 37837 Query 14653 TTGCTCTTCATTGCTGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTC 14709 | || | | | | | | |||| |||||| | |||||| | ||| | ||| Sbjct 37838 ACGTTCATTTTCGGTCATTTTGTTTTCCCAATCATGAAGATCCTTGCTCAAATCGATTTC 37897 Query 14710 ATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATa 14745 ||| |||||||||| ||| ||||||||||||| Sbjct 37898 TTCAGCTGTCCAAAAGGAAGCTTCAGCTTTTTTATA 37933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482342223580800