Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq70 311 8e-80 seq106 159 3e-34 seq109 113 4e-20 seq11 102 7e-17 seq53 96.9 3e-15 >seq70 Length=105670 Score = 311 bits (344), Expect = 8e-80 Identities = 1187/1852 (64%), Gaps = 27/1852 (1%) Strand=Plus/Plus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGAC 22204 || ||||| ||||||||||| ||||| | ||| | | ||| | ||||| || || Sbjct 2992 GTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAGCCATAAAAGTGCATACTG 3051 Query 22205 GTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATA 22264 || | || ||| | | || |||| | | || || ||||| || || ||| Sbjct 3052 GTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATA 3111 Query 22265 AACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTC 22324 |||| || ||||| || ||||| | || | ||||| || |||||||| || ||| Sbjct 3112 TACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACAGTC 3171 Query 22325 TTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCT-CTGGACGGACCCGTTATT 22383 ||||| || | | | | | || || | | | | | ||| | ||||| | Sbjct 3172 TTGTAGAGATCTTTCAAGTTTTGAGGGAT-GCTGGGCACGTTCTGAATAGACCCTCCGTC 3230 Query 22384 GTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGAC 22443 ||||||| || || | ||||||||| | ||| || || || ||| || Sbjct 3231 AGCCATGATCATGTTCTTCACATCATCGTTCCAGAGACCCATATCGACCAGATCACGGAG 3290 Query 22444 CAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGA 22503 | | |||| |||| ||| | || || || | || || || ||| | |||||| Sbjct 3291 TAACCAAGGGTTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGTTGGA 3350 Query 22504 TGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCAT 22563 |||| | ||||| ||| |||||||| || || || |||| || || || || ||||| Sbjct 3351 TGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCAT 3410 Query 22564 CGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGA 22623 || || | ||| || ||||| | | || ||||| | ||| || |||||| | Sbjct 3411 AGGAGCAACCAGCAGAGAGTTGCGGACACCATGCTTAGCAATCTTTTCCTTGAGTGCGGC 3470 Query 22624 CCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCG 22681 ||||||||| || | || || || ||||| |||||| || ||||||| | || | Sbjct 3471 CCAGTCCCAGAGGTTGGTAGGTGTGACATT---CCACATGTCATATTGCAGGATACCCTT 3527 Query 22682 CGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAG 22741 ||| | ||||||||||| || |||||||| || ||||| | | || | |||||| Sbjct 3528 GGACACA--GGGCTGCCTTCATAGGTTTCGTAAGGTCCATACTTTTCAGCCAACTCGCAG 3585 Query 22742 CTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC- 22800 || |||| || | | || || || || ||||||| ||||||| | ||| Sbjct 3586 GAGGCTTCCAGGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCT 3645 Query 22801 ---GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAAC 22857 || || ||| | || ||| | || ||| | ||| || | || ||||| Sbjct 3646 TCAGGTGA----ATCGAATGGATAACGAAGAGCCATGAAAGTGTCGGCTAAGCCTTGAAC 3701 Query 22858 GCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCA 22917 |||| ||| ||||||| || | || || || || || ||| | |||||| | Sbjct 3702 ACCTAAACCAATCGGTCTGTGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTA 3761 Query 22918 ATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNN 22977 ||| |||||| | ||||||||||||| || | || || || | Sbjct 3762 ATTGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTT 3821 Query 22978 NTCAAAGTCGTA-AACGCCCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGAT 23036 | || || || | | |||| | ||| | | | || || ||||| | | Sbjct 3822 TTGGAAATCATACTTTTCTCTATTG-ATCACATAGGTAGGCAGAGCAATGGAGGCCAAGT 3880 Query 23037 TGCATACGGCCACCTCGTCTTTGGA--CGTGTACTCTACAATTTCGGTACATAGATTGCT 23094 | || || || || || || ||| || ||| || |||||||| ||||| |||||||| Sbjct 3881 TACAGACAGCGACTTCATC--AGGACTCGAGTATTCAACAATTTCTGTACACAGATTGCT 3938 Query 23095 ACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAG 23154 ||||| ||||| ||||| || ||| || || |||| || || | |||||| ||||| Sbjct 3939 GCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAG 3998 Query 23155 CATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAG- 23213 ||| | || |||| ||||| || | || | || || ||||| | |||| Sbjct 3999 TATGAATGGATTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGC 4058 Query 23214 CGTGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATT 23273 | ||| | || | | || ||||| ||||| |||| || | || |||| | Sbjct 4059 CTTGATCGTTTCTCTAG-CTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACT 4117 Query 23274 CGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTG 23333 || |||| | || | || || | | | ||||| | ||| ||| || Sbjct 4118 CGTCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGACCA-ATCA 4176 Query 23334 AGTCATTTTC-AACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCG 23392 | | || || || ||| |||||||| || ||||| ||||| |||||||| || Sbjct 4177 CCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGAACAGATCA 4236 Query 23393 CGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCC 23452 || || | | || |||||||| ||| ||| ||| || |||||| || | ||| Sbjct 4237 CGAGCCCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGTAAAAATGTCT 4296 Query 23453 GCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCG 23512 |||||||| || || | ||| | || || |||||||| | |||||| || || |||||| Sbjct 4297 GCATGCCAAGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCACCTTGATCG 4356 Query 23513 ACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCG 23572 || ||||| ||||| |||||| | || | |||||| |||| | |||||||| ||| Sbjct 4357 ACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAATCCGTTGGAGTAACCG 4416 Query 23573 CCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCT 23632 ||| || | || || | || |||| |||||||| || || || || || Sbjct 4417 TTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAAGCCAATACCG 4476 Query 23633 CCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTG 23692 || | | || || || || || ||| || || || ||||| || ||||| Sbjct 4477 CCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAA 4536 Query 23693 TCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAG 23752 || ||||| | | || |||||| || |||||||| || | || || | || Sbjct 4537 TCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTGCATTA 4596 Query 23753 AACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATG 23812 || || || || || ||||| |||||||||| | ||||| | ||||| || || || Sbjct 4597 AATAGAGTAGGACTAGCGTGTGTAAAGTATCTTTCGGACATCAAGTTGTATGTCTCAATA 4656 Query 23813 GCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGT 23872 || |||||||| || ||| || |||||||| || || ||||| |||| | ||||| Sbjct 4657 GCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGCTGAGGA 4716 Query 23873 CTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCA 23932 | ||| | | ||||| ||| |||| || || ||||| | | ||||| || ||| Sbjct 4717 CGTTCGGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGAGTTTTGAAACCA 4776 Query 23933 AAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGT 23984 || ||| || || || ||||| || | | ||||| || ||||| |||| Sbjct 4777 AAGAAGTTGTACTTGAAATCACGGTCATAGATGATGGCAGAGTTCAAGCGGT 4828 >seq106 Length=79482 Score = 159 bits (176), Expect = 3e-34 Identities = 532/820 (65%), Gaps = 16/820 (2%) Strand=Plus/Minus Query 57582 TACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTG 57641 || ||||| || ||||| || |||||||| | |||||| | || || |||||||| Sbjct 37933 TATAAAAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTGAGCAAGGATCTT 37874 Query 57642 AGCGATTGGGATTCCCTCAAAGAATCTGAGA-GAAATTTTATTAAACAC----GTGTTGG 57696 |||||||| | ||| | | | | ||| ||| || | | | || |||| Sbjct 37873 CATGATTGGGAAAACA--AAATGACCGAAAATGAACGTTTCTTTATCTCTCGTGTCTTGG 37816 Query 57697 CGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAG 57756 | || || || | || ||||| |||||||| || || ||||| ||| |||| | | Sbjct 37815 CCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTTTTGTGATG 37756 Query 57757 AAGTGCAAG-TGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTG 57815 |||| |||| | | || || | ||| || || || |||||| | ||||||||| | Sbjct 37755 AAGT-CAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTGAAAACATT 37697 Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGT 57875 || |||||| || || | || || || || | || || ||| | |||||| Sbjct 37696 CACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAAGAGAAAGAA 37637 Query 57876 AGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATC 57935 | || || || || || || || || ||| | ||||| || ||| | || Sbjct 37636 ATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAGAGAAAGGCTGATTGGGCCTTC 37577 Query 57936 AAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTC 57995 || ||||| | | | | | || || ||| | || | || || || || ||| Sbjct 37576 AAGTGGATTTC---CTCAAACGGTTCCTTTGCTGAGCGCCTTGTTGCCTTTGCTGCTGTC 37520 Query 57996 GAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTG 58055 |||||||| ||||| || || |||||| | || |||||| | |||||||| || || Sbjct 37519 GAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAAGAAACGTGGTTTG 37460 Query 58056 ATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGAT 58115 |||||||| |||| || ||||| || ||||| | || || || ||||| |||||||| Sbjct 37459 ATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTCATACTGAC 37400 Query 58116 TTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGAC 58175 ||||| || || | | | ||| || || || | | || ||| || ||| Sbjct 37399 TTTGCTTGTCTTTTATTTACCCACCTTCGTAAGCGTCCTAGCCAAGAACGCGTCAAGGAT 37340 Query 58176 ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCC 58235 || ||| || || ||| || ||| | || ||| | || || || || || || || Sbjct 37339 ATCATCTTGGAAGCTGTCAGCATTGAACAAGAATTTTTGACGGATGCTCTTCCCGTTGCT 37280 Query 58236 ATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTT 58295 | | || ||||| || ||||||| | |||||||| || ||||| || | || Sbjct 37279 CTCATTGGCATGAATTCTGCCTTGATGTGTCAATACATTGAATTCGTTGCTGATCGTCTC 37220 Query 58296 TTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGA 58353 || | | || | || || | | ||||| | | ||||| ||||| |||||| Sbjct 37219 ATGGTTGCTCTTGGGTTCGACAAGAT--TTACATGGCTACTAATCCATTTGACTTTATGG 37162 Query 58354 ATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaa 58393 | ||||||| ||| | |||||||| ||||| || ||||| Sbjct 37161 ACATGATCTCTCTCCAAGGCAAGACCAACTTCTTTGAAAA 37122 >seq109 Length=78937 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| || || || || || || || | || || ||| | || Sbjct 18521 CATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTCGAATCTTC 18462 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | || ||||| | || ||||||||||| | || || || || Sbjct 18461 TGACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCA 18402 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || ||||| ||||| | ||||| | || | ||||| ||||| Sbjct 18401 ACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAA 18342 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||| ||||| |||||||| |||| ||| | || | || |||| Sbjct 18341 CATTCAAAAGGAATCTACTCTTCACTTGGTCCTTCGTCTCCGTGGTGGTA 18292 >seq11 Length=236632 Score = 102 bits (112), Expect = 7e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || || ||| |||||| ||||| || | || ||||||||||| | || || || Sbjct 13 TCTGATAGTATCGAAAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCTCCTGAT 72 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || ||||| || ||||| ||||| ||| | ||||| | ||| |||| ||||| Sbjct 73 CAACAACGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGTCGTACTTTGAGTGATTAC 132 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||||||||| |||||||| |||| ||| | || | |||||| Sbjct 133 AACATCCAAAAAGAATCTACTCTTCACTTGGTCCTTCGTCTTCGTGGCGGT 183 >seq53 Length=125223 Score = 96.9 bits (106), Expect = 3e-15 Identities = 203/303 (67%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727 ||| || |||||||| ||||| ||||||||||| | || | ||| || ||| | Sbjct 91385 AGTATCATAGATGCCTTCGATACTGTCCTCTTTCATTTGAACAAGGAAGCAACTAGATAA 91326 Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787 ||| | ||| || ||| | || ||||| ||| || | || || ||||||||| | Sbjct 91325 TTGAGGTTTAGGTGTACCAGCGTTGAACAATGTAGGTGTAGCATGAGTAAAGTATTTAGA 91266 Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847 ||||| |||| || || | |||| || | ||| | ||||| || || || || Sbjct 91265 TGACATAAGATCATAGGTTCTAAAGGCGCTTTCTAGGTCATTACCGTGAATGCCAATAGC 91206 Query 23848 GACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATA 23907 || ||||| ||||| |||||||||| || || | || || || || | || || Sbjct 91205 AACACGCATAATCATATATTGAGGTCGTTCAACGATTTCGTTATTGATCTTTAGCAAGTA 91146 Query 23908 TGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTAT 23967 ||| | | ||||||||| ||||| ||| | | | ||| || | |||||| | || Sbjct 91145 GCTACGCTCTAACGTTTTAAAGCCAAAGAAGTTAAAATCAAAATCTCTATCGTGAATGAT 91086 Query 23968 GGC 23970 ||| Sbjct 91085 GGC 91083 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 22153 ATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTT 22212 ||| |||||||| ||||| || ||| ||||||| || ||||| || || || |||||||| Sbjct 93110 ATAGTACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAAGTCAATTT 93051 Query 22213 TCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCC 22272 ||| | | || | | | | | ||| | || ||| ||||| ||||| ||||| Sbjct 93050 GCCAAAGTTTGGTTCGGCAGTAAATAAATTCATAGATTGAGATTGATCAATAAAGGCTCC 92991 Query 22273 TCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAG 22332 || ||| |||||||| | || | || | || || ||||| ||||||||||| || Sbjct 92990 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCACACGGTCTTGTATAG 92931 Query 22333 TT 22334 || Sbjct 92930 TT 92929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763279635200