Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq106 136 8e-27 >seq106 Length=79482 Score = 136 bits (150), Expect = 8e-27 Identities = 301/447 (67%), Gaps = 7/447 (2%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||||||||||||||| || ||||| |||||||| |||| | || || ||||| || | Sbjct 37539 TTGTTGCCTTTGCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATCTTTT 37480 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | ||| | |||| ||| | || | | |||||| || || | | | | Sbjct 37479 GGCTCAAGAAACGTGGTTTGATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTG 37420 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 | |||||||||||| |||||||| || | | || | | || || || Sbjct 37419 ATGAAGGTCTTCATACTGACTTTGCTTGTCTTTTATTTACCCA--CCTTCGTAAGCGTCC 37362 Query 102096 CATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155 | | | |||| | | || || || ||||| ||| | ||||||||||||||| Sbjct 37361 TAGCCA-AGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAAGAATTTT 37303 Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAA--CTGCAAGTTGATGAGCCAGTA 102213 | || | | | || || ||| | | || ||||| |||| |||||| | || || Sbjct 37302 TGACGGATGCTCTTCCCGTTGCTCTCATTGGCATGAATTCTGC--CTTGATGTGTCAATA 37245 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGT 102273 ||||||||| || || ||| || |||||| | || | || ||| || | | Sbjct 37244 CATTGAATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGGTTCGACAAGATTTACATGGC 37185 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 ||| || || || || ||||||| || || ||| | ||||||||||| ||||| Sbjct 37184 TACTAATCCATTTGACTTTATGGACATGATCTCTCTCCAAGGCAAGACCAACTTCTTTGA 37125 Query 102334 AAAGAGAGTCGCCGAGTATCAACGTGC 102360 |||| | ||| |||| ||||||||||| Sbjct 37124 AAAGCGTGTCTCCGATTATCAACGTGC 37098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989576899734800