Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq106 190 2e-43 >seq106 Length=79482 Score = 190 bits (210), Expect = 2e-43 Identities = 534/816 (65%), Gaps = 8/816 (1%) Strand=Plus/Plus Query 13602 TTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13661 |||||||||||||| || || |||| || || || | |||||||| ||||||||||| Sbjct 37122 TTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATGTCCATAAAGTCAAATGGATTA 37181 Query 13662 ATTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCA 13721 | | ||| | | || || | || || | | | | | |||||||| || ||| Sbjct 37182 GTAGCCATGTAAATCTTGTCGAACCCAAGAGCAACCATGAGACGATCAGCAACGAATTCA 37241 Query 13722 ATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTT 13781 || |||||| |||| || || ||||||| || || || || |||| || || Sbjct 37242 ATGTATTGACACATCAAGGCAGAATTCATGCCAATGAGAGCAACGGGAAGAGCATCCGTC 37301 Query 13782 AAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAA 13841 |||||||||| ||| || ||||| || || ||| | | || | | Sbjct 37302 AAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATCCTTGACGCGTTCTTGGCTA 37361 Query 13842 GGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCT 13901 ||| | | || || |||| | | ||| ||||| ||| |||||| || ||||| Sbjct 37362 GGACGCTTACGAAGGTGGGTAAATAAAAGACAAGCAAAGTCAGTATGAAGACCTTCATCA 37421 Query 13902 CTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAA 13961 | || || | ||| || ||||| || || |||||||| || ||||| || | |||| Sbjct 37422 CGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAAACCACGTTTCTTGAGCCAA 37481 Query 13962 AATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAAT 14021 || || | |||||| || || || ||||| || || || || |||||||| || | | Sbjct 37482 AAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACAAGG 37541 Query 14022 CGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAttttttt 14081 || || |||| || | ||| | || ||||| || ||||| |||| ||| | Sbjct 37542 CGCTCAGCAAAGGAACCGTTTGAG---GAAATCCACTTGAAGGCCCAATCAGCCTTTCTC 37598 Query 14082 ttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAA 14141 || ||| || || || ||||||||| ||| | ||| ||||||| || | Sbjct 37599 TTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTTATCTTTG 37658 Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 || || || ||||| | | || || |||| | ||| |||||||| || || ||| Sbjct 37659 ATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATGTTTTCAATCATGATTTGA 37718 Query 14202 AAACCATAAAAGCATCTAGCTTCCG-ACCATTGTACTTCCGAGTAAAATCTTTCGGCCAA 14260 || ||||| || ||| ||||||| | | ||| ||||| |||| ||| |||| Sbjct 37719 AAGCCATAGAAACATTTAGCTTCAGGAATCTTG-ACTTCATCACAAAAGTTTTGAACCAA 37777 Query 14261 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14320 ||||||||||| || ||||| | | ||||| || ||||| | |||||| | Sbjct 37778 GTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCAAGACACGAGAGATAAAGAA 37837 Query 14321 TTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTC 14377 | || | | | | | | |||| |||||| | |||||| | ||| | ||| Sbjct 37838 ACGTTCATTTTCGGTCATTTTGTTTTCCCAATCATGAAGATCCTTGCTCAAATCGATTTC 37897 Query 14378 ATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATA 14413 ||| |||||||||| ||| ||||||||||||| Sbjct 37898 TTCAGCTGTCCAAAAGGAAGCTTCAGCTTTTTTATA 37933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479724641904000