Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq59 111 2e-19 >seq59 Length=120760 Score = 111 bits (122), Expect = 2e-19 Identities = 366/561 (65%), Gaps = 35/561 (6%) Strand=Plus/Plus Query 6721 AATTCAAAATCTTCAAATTTAAAATCACATAAATTATCAGACtttttttttAATATTACA 6780 ||| ||||||||||||| || |||||| | | |||| ||||| || || || | Sbjct 8448 AATACAAAATCTTCAAACTTGAAATCATCGATAGTATCT-ACTTTACGGTTGATTTTTAA 8506 Query 6781 AC-AGGTGAAGGTTTTATTGATCGAGTTAA--TTGTTCTTTTATAGCTTTTATATGATCT 6837 | ||| |||| || | || ||| | ||||| || | || | | |||||| Sbjct 8507 AGTAGGGAAAGGCTTGGGT--TCACGTTGAACTTGTTGCTTGAGTGCGTCAAGATGATCC 8564 Query 6838 AAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACAGCT 6897 | ||||| ||| | ||| || | ||||| || |||||||| |||| | ||| | Sbjct 8565 ACATAAACATGTGTATCGCCCATTGTATGTATGAATTCACCAGGTTCAAGATCTGTTACA 8624 Query 6898 TGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCC 6957 || ||||| | ||| || | |||||||||||| | ||| ||||| ||||| | |||| Sbjct 8625 TGTGCAATCATGCGTGTCAAAAGTGCATAAGAAGCAATATTGAAAGGAACACCCAGTCCC 8684 Query 6958 ATATCTGCTGATCTTTGATAACATTGACAAGATAAAAT------------AT-------T 6998 ||||| || | |||||| ||| ||||| | || | Sbjct 8685 ATATCGCAAGAACGTTGATAGAGCACACAGGATAACTTGGCACGCCCGCCATCCTGAGGT 8744 Query 6999 GTCTATAG---CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCT-- 7053 | | ||| ||||||| ||||| || ||||||| || |||||| | | |||| Sbjct 8745 GGGT-TAGATACATAAAACTGACAAAAGGCATGACAAGGTGGTAAAGC--CATGATAGGA 8801 Query 7054 ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAAT 7113 ||||| | || ||||| || | | | || | | |||| | ||||| |||||| || Sbjct 8802 ATATCTGCAGGGTTCCATGCTGATAGAATGATTCTGCGATCAGTGGGATT-GTTTTTTAT 8860 Query 7114 TTTGTTA-TAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATT 7172 | | | | | | |||||||||||| | || || ||| ||||| ||| | ||| | Sbjct 8861 AGTATCAATCACTTGTTGTAATTGATCAACGCCTTGTCCTGTATAATCAGTGTCACAGTC 8920 Query 7173 TATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTC 7232 | || || || ||||| |||||||||||||| || |||| || || | |||||||| Sbjct 8921 AACGTACTTGGCGCCAAAGTGTCTCCATTGAAATCCGTAAACTGGTCCAAGGTCACCTTC 8980 Query 7233 TTCACGATGATTAAATCCTAA 7253 ||| ||| ||| ||||| Sbjct 8981 ACGACGGTGAGTAAGACCTAA 9001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595867828896000