Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq109 138 1e-27 seq165 93.3 4e-14 >seq109 Length=78937 Score = 138 bits (152), Expect = 1e-27 Identities = 159/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||||||||||||||| | |||||| ||||| ||| || || ||| | Sbjct 18312 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCT--TAGGGTACGACCATCTT 18369 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || ||||| || ||||||| | | ||| ||||| |||||||||||||| ||||| | Sbjct 18370 CGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTT 18429 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| ||| || || | ||| |||||||| ||||| || | || || || | Sbjct 18430 GAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCGACTTCTAAAGTAATTGTCT 18489 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 |||||||||| || || |||||||| |||||| Sbjct 18490 TTCCAGTAAGTGTCTTGACAAAGATTTGCATG 18521 >seq165 Length=49949 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 || ||||| | ||||||||||||||| | ||| || ||||||| || || || || | Sbjct 37846 ACTAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCA-AG-GTACGACCGTCTT 37903 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || ||||| ||| ||||||| | | ||| || || |||||||||||||| ||||| | Sbjct 37904 CGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTGTCTT 37963 Query 94917 AAATTTTTGCCTTGACG 94933 ||| ||| ||||||| Sbjct 37964 GAATCTTTTGCTTGACG 37980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288061961600