Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq60 174 3e-38 >seq60 Length=120286 Score = 174 bits (192), Expect = 3e-38 Identities = 353/524 (67%), Gaps = 0/524 (0%) Strand=Plus/Minus Query 193645 CTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGT 193704 |||| | || ||||||| |||||| |||||| || || || ||||| ||| |||| | Sbjct 116684 CTGAAGTTTACAATCTTGCAGCTCAATCTCATGTCAAGGTCTCTTTTGACATGTCAGAAT 116625 Query 193705 ATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGG 193764 |||| | | || || ||| | || || ||| | ||||||| || | |||| | | Sbjct 116624 ATACCGGTGACGTCGACGCTCTTGGCACACTTCGTTTACTTGATGCTATCCGTACCTGTG 116565 Query 193765 GAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTC 193824 | | | ||||||| | ||||| || |||||| ||||| |||||| || Sbjct 116564 GTTTAACCGATCGTGTTCGCTTTTATCAAGCTTCTACCTCTGAACTCTATGGTAAAGTAG 116505 Query 193825 TAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAA 193884 | | || || | | ||||| ||||| || |||| || || |||||||||||||| | Sbjct 116504 TTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGCCA 116445 Query 193885 AGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTT 193944 | | ||||| |||||||| | || || ||||| ||||| | || || Sbjct 116444 AACTTTATGGCTATTGGATTACGGTCAACTACCGTGAATCATACAACATGTTTGCCTGTA 116385 Query 193945 CTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGA 194004 ||||||||||||||| || ||||| || | | ||| || || || || || |||| Sbjct 116384 ATGGTATTCTCTTCAACCATGAATCACCTCGTCGTGGTCGTACTTTCGTTACCCGAAAGA 116325 Query 194005 TTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATC 194064 |||| | | | | | | ||| | ||| || || |||||||| |||||| Sbjct 116324 TTACTCGTGCTGTTGCGGACATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTAATA 116265 Query 194065 TTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGT 194124 || |||||||| | ||||||||||| || |||||||| |||| |||||| | ||| Sbjct 116264 TTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCATGC 116205 Query 194125 TGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 |||| || ||| | || | |||| || | ||||| |||||| Sbjct 116204 TGCAGCAAGATCAGCCTCAAGATTTCGTCTTGGCTACTGGTGAA 116161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807549547113600