Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq106 149 7e-31 >seq106 Length=79482 Score = 149 bits (164), Expect = 7e-31 Identities = 541/841 (64%), Gaps = 20/841 (2%) Strand=Plus/Plus Query 21187 TTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTC 21246 ||||||||| || | ||||| || || || ||||| |||| | || || || Sbjct 37103 TTGATAATCGGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATGTC 37162 Query 21247 CATAAAATCAAATGGATTTTCAG--ATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304 |||||| ||||||||||| || || ||||| || | || || || | | Sbjct 37163 CATAAAGTCAAATGGATTAGTAGCCATGTAAATCTTGTCGAAC--CCAAGAGCAACCATG 37220 Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364 | | ||| || || ||||| || ||||||||||| || || ||||||| || || | Sbjct 37221 AGACGATCAGCAACGAATTCAATGTATTGACACATCAAGGCAGAATTCATGCCAATGAGA 37280 Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATA 21424 || |||||||| | |||||||| || ||| || ||| ||||| | || ||| Sbjct 37281 GCAACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATA 37340 Query 21425 TTTATTATCCTAGATGTACTAGGGGGAT-ACAATAATTGTTTAAACATCAAACATGCAAA 21483 | | | | | ||||| | | || | | || |||| | | ||| ||||| Sbjct 37341 TCCTTGACGCGTTCTTGGCTAGGACGCTTACGA-AGGTGGGTAAATAAAAGACAAGCAAA 37399 Query 21484 ATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCAT 21543 ||| ||| | ||||||||| | || || |||||||| ||||| ||||||||||| Sbjct 37400 GTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCAT 37459 Query 21544 TAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTC 21603 || || | || || | |||||| || || ||||| | || || ||||| || || || Sbjct 37460 CAAACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTC 37519 Query 21604 AACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTT 21663 || |||||||| ||||| | || ||| | | || | || | ||||| || Sbjct 37520 GACAGCAGCAAAGGCAACAAGGCGCTCAGCAAA---GGAACCGTTTGAGGAAATCCACTT 37576 Query 21664 TTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAGATG 21723 ||||| | |||||| || |||||| || || |||||||| |||||| Sbjct 37577 GAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGC--AGAAAAGAGC 37634 Query 21724 AtttttttCATCT---ACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGA 21780 |||| |||| ||| ||| | || ||| || |||| | Sbjct 37635 ATTTCTTTC-TCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGC 37693 Query 21781 ATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTC-TGAACATTGAA 21839 || || ||||| ||| || ||||| || || |||||| | || || ||| ||| | Sbjct 37694 GTGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTG-A 37752 Query 21840 CCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAA 21899 | || | |||| |||| ||||||||||||| || || ||||| | ||||| | Sbjct 37753 CTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGA 37812 Query 21900 ATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTA 21956 | ||||| | | ||||| | ||||| || || || | | |||| |||||| Sbjct 37813 AGGCCAAGACACGAGAGATAAAGAAACGTTCATTTTCGGTCATTTTGTTTTCCCAATCAT 37872 Query 21957 ATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTAT 22016 | ||| || ||||| | |||||||| |||||||||| ||| ||| ||||||| Sbjct 37873 GAAGATCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTTTTAT 37932 Query 22017 A 22017 | Sbjct 37933 A 37933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531897076694400