Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq70 457 1e-123 seq106 269 3e-67 seq53 111 2e-19 >seq70 Length=105670 Score = 457 bits (506), Expect = 1e-123 Identities = 1369/2098 (65%), Gaps = 36/2098 (2%) Strand=Plus/Plus Query 62025 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 62084 ||||| || || ||||| || || |||| || ||| || ||||| |||||||| Sbjct 2992 GTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAGCCATAAAAGTGCATACTG 3051 Query 62085 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 62144 || || || | | | || || || ||| ||| |||| | ||||||||| || || Sbjct 3052 GTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATA 3111 Query 62145 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 62204 | || || | || |||||||| | ||||| || ||| | |||||||| | ||| Sbjct 3112 TACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACAGTC 3171 Query 62205 TTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATGGATCCACCATCT 62261 || || | || | || | | ||| | | | | |||||||| || || || || Sbjct 3172 TTGTAGAGATCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGACCCTCCGTCA 3231 Query 62262 GCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 62321 ||||| ||| | ||||| | ||||| ||||| | | ||| | | | | || Sbjct 3232 GCCATGATCATGTTCTTCACATCATCGTTCCAGAGACCCATATCGACCAGATCACGGAGT 3291 Query 62322 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 62381 | || || || | ||| |||| || || | || | || ||||| | || Sbjct 3292 AACCAAGGGTTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGTTGGAT 3351 Query 62382 GTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 62441 || || ||||| | | ||||| || | ||||||| ||| || ||||| |||||| Sbjct 3352 GTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATA 3411 Query 62442 GGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTT 62499 || || |||| | | || | | ||| ||| | | || || || || || | Sbjct 3412 GGAGCAACCAGCAGAGAGTTGCGGACACC--ATGCTTAGCAATCTTTTCCTTGAGTGCGG 3469 Query 62500 CCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT-- 62557 |||| | ||| || | | ||| || ||| || ||||| || Sbjct 3470 CCCAGTCCCAGAGGTTGGTAGGTGTGACATTCCACATGTCATATTGCAGGATACCCTTGG 3529 Query 62558 --ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAA 62615 || || | | || |||| || ||||| ||||| | ||| ||||| | || || Sbjct 3530 ACACAGGGCTGC----CTTCATAGGTTTCGTAAGGTCCATACTTTTCAGCCAACTCGCAG 3585 Query 62616 CTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGTGC 62674 || || | ||| | | || |||||||| ||||| | | || | | |||| || Sbjct 3586 GAGGCTTCCAGGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GC 3644 Query 62675 TTCCAGGCTATCAAATGGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACAC 62733 ||| | ||| ||||||||| ||||| || || | ||| ||||| |||||||||| Sbjct 3645 TTCAGGTGAATCGAATGGATAACG-AAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACAC 3703 Query 62734 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 62793 | | ||| || ||||| |||||||| || || |||| ||||| | |||||| |||| Sbjct 3704 CTAAACCAATCGGTCTGTGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAAT 3763 Query 62794 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGA 62853 | ||||| || || || || | ||||| || || ||| ||||| | |||||| Sbjct 3764 TGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTT 3823 Query 62854 GAAAATCAAA---TCGCCCATCTATTACAAACATGTTCAAGGCAACAGATGCCAGATTAC 62910 | |||||| | | | || || ||| | | || |||| || |||| |||| Sbjct 3824 GGAAATCATACTTTTCTCTATTGATCACATAGGTAGGCAGAGCAATGGAGGCCAAGTTAC 3883 Query 62911 AAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACT 62970 | || || || |||| || | || |||| | || || || || ||||| || |||| Sbjct 3884 AGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTACACAGATTGCTGCACT 3943 Query 62971 TGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGA 63030 |||| || || || ||||| |||||||||||| ||||||| ||||||||||| || |||| Sbjct 3944 TGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGA 4003 Query 63031 ATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA 63090 ||||| | || || || | |||| ||| | ||| || | ||| | | ||||||| | Sbjct 4004 ATGGATTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGCCTTGA 4063 Query 63091 TTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTC 63150 | | | | ||| | ||| | ||||||| | ||| | | |||||||| | Sbjct 4064 TCGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACTCGTCAC 4123 Query 63151 CCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 63210 |||| | | | ||||||||| |||| ||||| | || ||||| || || | | Sbjct 4124 CCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGACCAATCACCACCGT 4183 Query 63211 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTT 63269 | | || || | ||| || |||||||||||||| ||||| ||| || ||||| | | Sbjct 4184 CTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGC-ATAGAACAGATCACGAGCC 4242 Query 63270 CTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGC 63329 || ||| || || || || ||| | || | || | | ||| || | |||| Sbjct 4243 CTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGTAAAAATGTCTGCATGC 4302 Query 63330 CACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTAT 63389 || ||||||||||| || || | | || || || || || || || ||||| | || Sbjct 4303 CAAGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCACCTTGATCGACATAA 4362 Query 63390 CTAGCGGTGTTATTATAAACTCTCAACATTGG-AATAATACCGTTTGATATACCATTGGT 63448 | ||| || || || |||| | | ||| || || ||| ||||| || ||| ||||| Sbjct 4363 CGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAAT-CCGTTGGAGTAACCGTTGGT 4421 Query 63449 ACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGC 63508 |||| || || |||||| |||||||| || ||| || || || || ||||| Sbjct 4422 GCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAAGCCAATACCGCCTGC 4481 Query 63509 CATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATC 63568 | || |||||| || || ||| | ||| ||||||||||| || || ||| || Sbjct 4482 TGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTC 4541 Query 63569 GATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAA 63628 ||||| | || | || || |||||| ||| ||||| || || |||||||||| Sbjct 4542 TTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTGCATTAAATAG 4601 Query 63629 GGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGA 63688 |||||| |||||| ||||| || |||| || | | ||||| ||||||||||||| Sbjct 4602 AGTAGGACTAGCGTGTGTAAAGTATCTTTCGGACATCAAGTTGTATGTCTCAATAGCTGC 4661 Query 63689 GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63748 || ||||| | ||| || || | || |||||||| | || |||||||| | ||| Sbjct 4662 ATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGCTGAGGACGTTC 4721 Query 63749 AACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63808 | |||||| || || || | | ||| || || | |||||| |||||||| | Sbjct 4722 GGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGAGTTTTGAAACCAAAGAA 4781 Query 63809 GTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTT---GAGTTTATCCTTATAT 63863 |||||| ||||| || || || || || || | ||||| | | | | | |||| Sbjct 4782 GTTGTACTTGAAA--TCACGGTCATAGATGATGGCAGAGTTCAAGCGGTCAGCGTTATCC 4839 Query 63864 TTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGA 63923 || |||| | | | || | | || || || || || ||||| || | || ||| Sbjct 4840 ATGACAACTTTGTAC---GTTTCATTAGAGATCATGGGTGAGTGTTTGCCTGTCTTGGGA 4896 Query 63924 TTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGT 63983 || ||||| ||| | || || || || |||| | ||| | ||||| ||||||||||| Sbjct 4897 TTCACATAATTGTACAAGTCTTCAATTACTTGAGAAAAGACCTTTTTGGTTTCCTTGTGA 4956 Query 63984 AGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAA 64043 ||||| || | ||| || | || || | | |||||||| ||||| | || || | Sbjct 4957 AGATTAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTGGTCATA 5016 Query 64044 GTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATA 64101 || ||| |||| || || || | || | ||| || ||||| || || | |||| Sbjct 5017 TAAGCAGCTGTTTCTGCAGCAAGGTTATCGAGTTCGACAGTTGTAACACCTTGGTATA 5074 >seq106 Length=79482 Score = 269 bits (298), Expect = 3e-67 Identities = 562/834 (67%), Gaps = 11/834 (1%) Strand=Plus/Plus Query 33028 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 33087 ||||| ||||| || || || || || |||| | || || | ||||| || ||||| Sbjct 37116 ACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATGTCCATAAAGTCAAAT 37175 Query 33088 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACG 33147 ||||| ||| | | ||||| || | || || | || || | | ||| || ||| Sbjct 37176 GGATTAGTAGCCATGTAAATCTTGTCGAACCCAAGAGCAACCATGAGACGATCAGCAACG 37235 Query 33148 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 33207 ||||| || ||| ||||| || ||||||| || || || ||| |||||||| Sbjct 37236 AATTCAATGTATTGACACATCAAGGCAGAATTCATGCCAATGAGAGCAACGGGAAGAGCA 37295 Query 33208 GCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCT 33267 | || | |||||||||||||||| || || || || ||| | ||| |||| Sbjct 37296 TCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATCCTTGACGCGTTCT 37355 Query 33268 TCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCC 33327 | || || | | | || |||| | | ||| || || || || ||||| Sbjct 37356 TGGCTAGGACGCTTACGAAGGTGGGTAAATAAAAGACAAGCAAAGTCAGTATGAAGACCT 37415 Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || || | || || | ||| ||| || || | |||||||| | ||||| || || Sbjct 37416 TCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAAACCACGTTTCTTG 37475 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33447 |||||||| |||||||| || || ||||| |||||||| ||||| || |||||||||||| Sbjct 37476 AGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCA 37535 Query 33448 ATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTA-TCCACTTTTGAGCCCAATCGGC 33503 | ||| | ||| || | |||| | | | | | ||||||| |||||||| || Sbjct 37536 ACAAGGCGCTCAGCAAAGGAACCG----TTTGAGGAAATCCACTTGAAGGCCCAATCAGC 37591 Query 33504 CTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACT 33563 ||| | || | |||||| || || || || ||| |||||| | ||| || | | Sbjct 37592 CTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTT 37651 Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||| | |||||| || ||||||||||| || |||| | |||||||||||||| Sbjct 37652 ATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATGTTTTCAATCAT 37711 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || ||||| || ||||||||| |||| || | ||||| ||||| |||||| || Sbjct 37712 GATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCACAAAAGTTTTG 37771 Query 33684 CGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33743 |||| |||||||| || || || || | ||||| || ||||| ||| | || Sbjct 37772 AACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCAAGACACGAGAGAT 37831 Query 33744 AAAATATTTTTCGTCTGGTGTTAGTTTATT---CCAATCATTGATATCTTTAGATATATC 33800 ||| | ||| | | || | ||| || |||||||| | ||| || | ||| Sbjct 37832 AAAGAAACGTTCATTTTCGGTCATTTTGTTTTCCCAATCATGAAGATCCTTGCTCAAATC 37891 Query 33801 TACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGAT 33854 | |||||| |||||||||| || || || || |||||||| | | |||||| Sbjct 37892 GATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTTTTATAGAATTGCCAGAT 37945 >seq53 Length=125223 Score = 111 bits (122), Expect = 2e-19 Identities = 277/420 (66%), Gaps = 3/420 (1%) Strand=Plus/Minus Query 62033 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 62092 ||||||||| || || ||||| || |||| | ||||| |||||| || | ||| Sbjct 93110 ATAGTACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAAGTCAATTT 93051 Query 62093 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62152 | | | | || || || || | ||||||||||||| |||||| || |||||||| Sbjct 93050 GCCAAAGTTTGGTTCGGCAGTAAATAAATTCATAGATTGAGATTGATCAATAAAGGCTCC 92991 Query 62153 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 62212 || || || ||||| | || || || |||||| ||| ||||| | || || || | Sbjct 92990 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCACACGGTCTTGTATAG 92931 Query 62213 TCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAAT 62269 | || | ||| || |||| | | || ||| || || |||| || || || Sbjct 92930 TTTTTTGAGATCATCAGGAATGCCAGGAATACGCTGGATACTACCGCCATGAGCGATCAT 92871 Query 62270 CCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGG 62329 | | |||||||| | |||||||||||| | || | | | | | | | |||| | Sbjct 92870 CATGTTCTTGATGTTATCATTCCATAAATCGAGTTCAATGAGATCATTCAATAAATGCTG 92811 Query 62330 ATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGG 62389 || |||| ||| ||||| || || | || || |||||||| || || || || Sbjct 92810 GTTGACTATTTGGAATTCACCGCTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 92751 Query 62390 TTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 62449 || | | || ||||| ||||| |||||| ||| ||||| |||||||| || || Sbjct 92750 CTCGAAGCATTCGTTATTACCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 92691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622942839369600