Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq70 352 7e-92 seq59 154 4e-32 seq106 134 4e-26 >seq70 Length=105670 Score = 352 bits (390), Expect = 7e-92 Identities = 1339/2080 (64%), Gaps = 25/2080 (1%) Strand=Plus/Minus Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150 ||| |||| | |||||||||||||| | || || || ||||| | |||||| || || Sbjct 5078 GGTGTATACCAAGGTGTTACAACTGTCGAACTCGATAACCTTGCTGCAGAAACAGCTGCT 5019 Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210 ||| |||||| ||||||||||| | ||||||| |||||||| |||| | Sbjct 5018 TATATGACCACTCGCCATCCTGATTATGCTCTGTTGGCTGCGCGCATTGCCATTTCTAAT 4959 Query 363211 CTTCATAAAATGACATCAAATAAGT--TTTCCAGTGTCATGGATAGTCT-GTATAACTAT 363267 ||||| || || | |||| | || |||| || || || || || ||| || ||| Sbjct 4958 CTTCACAAG--GAAACCAAAAAGGTCTTTTCTCAAGTAATTGA-AGACTTGTACAATTAT 4902 Query 363268 GTCAATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATC 363327 || ||| | ||||| || || ||||| | || | |||| | || | || Sbjct 4901 GTGAATCCCAAGACAGGCAAACACTCACCCATGATCTCTAATGAAACGTACAAAGTTGTC 4842 Query 363328 CGTTCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGAT 363387 ||| || || || | | |||| ||||| ||| || |||| | Sbjct 4841 ATGGATAACGCTGACCGCTTGAACTCTGCCATCATCTATGACCGTGATTTCAAGTACAAC 4782 Query 363388 ATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGT 363446 | || || | || || | ||| || ||||| |||| || | || | |||| Sbjct 4781 TTCTTTGGTTTCAAAACTCTCGAGCGTTCTTACCT-TCTCAAGATTGACGGCAAGATTGC 4723 Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 ||||| || |||||| || | ||||||||||| || ||||||||| | | ||| |||| Sbjct 4722 CGAACGTCCTCAGCATTTGATCATGCGTGTTGCGATCGGTATCCATGGAACCGATATTGA 4663 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCA 363564 ||| || ||||| ||||| || ||| | || | | || || || ||||| | || Sbjct 4662 TGCAGCTATTGAGACATACAA-CTTG-ATGTCCGAAAGATACTTTACACACGCTAGTCCT 4605 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 || | | ||||| || || | | ||| ||||||||||||||||| | || | ||| Sbjct 4604 ACTCTATTTAATGCAGGCACACCTCGTCCCCAGATGTCTTCTTGCTTCTTGCTCACCATG 4545 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 || || ||||| ||||| ||||||| ||| || || || | ||||||| || |||||| Sbjct 4544 AAAGAAGATTCGATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAG 4485 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACA--GAACAGTTACATTC 363742 | |||||||| ||||| || || ||||| ||||||| || || |||||| Sbjct 4484 ACAGCAGGCGGTATTGGCTTAAACATTCACAACATTCGTGCTAGTGGATCA--TACATTG 4427 Query 363743 GCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 |||||| || ||||| || || || | |||||||| ||||| || ||||||| | Sbjct 4426 CCGGCACCAACGGTTACTCCAACGGATTGTTGCCCATGCTACGTGTTTTCAACAATACGG 4367 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | | || ||||| || ||||| ||||| || || || || ||||| | || | Sbjct 4366 CTCGTTATGTCGATCAAGGTGGTAATAAGCGTCCGGGCGCATTCGCAATGTACTTGGAAC 4307 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 || ||||| || |||||| ||| | || | || |||||| || ||||| ||| Sbjct 4306 CTTGGCATGCAGACATTTTTACCTTTTTAGACTTGCGAAAAAACTTTGGCAAAGACGAAA 4247 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT-G 363981 | | || ||||||||||||||||| || ||| || |||| | ||| ||| |||| || Sbjct 4246 TCAGGGCTCGTGATCTGTTCTATGCTCTCTGGATTCCTGATCTTTTCATGCAGCGTGTCA 4187 Query 363982 GAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041 ||| | ||| ||||||| || ||||| || | || ||| || | || | Sbjct 4186 GAGAC-GGTGGTGATTGGTCTCTGTTTTGTCCCAATGAGGCTCCTGGATTACATGAAATC 4128 Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101 ||||||||||| | ||||||||| || ||||| || ||| || |||| ||| | | Sbjct 4127 TGGGGTGACGAGTTTGTTGCTCTCTATGAAAAATACGAACGTGAAGGAAGAGCTAGAGAA 4068 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 || || || || ||||| |||| |||||| |||| | || | |||||||| | Sbjct 4067 ACGATCAAGGCTCAAAAGCTGTGGTATGCCATTTTGGAAGCTCAAACGGAGACAGGCAAT 4008 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || | || | || || ||| | || ||| | ||| || ||||| || | ||||| Sbjct 4007 CCATTCATACTCTATAAGGATGCTTGTAACAGAAAGAGTAATCAGCAAAACTTGGGTACG 3948 Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || || ||||| || ||||| || ||| |||||||| | ||| || || || Sbjct 3947 ATCAAGTGCAGCAATCTGTGTACAGAAATTGTTGAATACTCGAGTCCTGATGAAGTCGCT 3888 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT----AAAAGATGGTACTTTTGA 364337 || |||||| | || || || || || || | | ||| || ||| | | | ||| Sbjct 3887 GTCTGTAACTTGGCCTCCATTGCTCTGCCTACCTATGTGATCAATAGA-GAAAAGTATGA 3829 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397 ||| | || | || || ||| | | ||| | || | ||||| | ||||| Sbjct 3828 TTTCCAAAAACTGCACGATGTTACCAAGGTTATCACTAGAAACTTGAACAAGATCATCGA 3769 Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGG 364457 | ||||| ||||| | |||||||| | || || | | | || | |||||||| Sbjct 3768 TATCAATTACTATCCTGTCATCGAAGCCGAAAGATCCAACAAGAGACACAGACCGATTGG 3709 Query 364458 TCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT-GATGCTCAAGATGGCATTTGATTCGC 364516 | | ||||| || ||| | || ||| ||| || | | || || |||| ||||| | Sbjct 3708 TTTAGGTGTTCAAGGCTTAGCCGACACTTTCATGGCTCTTCGTTAT-CCATTCGATTCAC 3650 Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576 |||| || | || | | ||||||||||| || || ||| || || | Sbjct 3649 CTGAAGCCAAGCAGTTGAACATTCAAATCTTTGAAACCATCTACCATGCTGCCCTGGAAG 3590 Query 364577 CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTT 364636 | || || || ||||| ||| | ||| ||| || ||||| || |||| | | Sbjct 3589 CCTCCTGCGAGTTGGCTGAAAAGTATGGACCTTACGAAACCTATGAAGGCAGCCCTGTGT 3530 Query 364637 CGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGG 364696 | |||| | | || | ||| | ||||||||||| || | || ||| |||||| Sbjct 3529 CCAAGGGTATCCTGCAATATGACATGTGGAATGTCACACCTACCAACCTCTGGGACTGGG 3470 Query 364697 ATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756 | || || || ||||||||| |||||||| || | || || | Sbjct 3469 CCGCACTCAAGGAAAAGATTGCTAAGCATGGTGTCCGCAACTCTCTGCTGGTTGCTCCTA 3410 Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816 |||| || || || ||| | || || ||||| ||| || || || ||||| | ||| Sbjct 3409 TGCCTACTGCCTCCACTTCTCAAATGCTCGGTTTCAATGAATGTTTTGAACCTTACACAT 3350 Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876 ||| | || | || || || || || || |||| | | || || | || Sbjct 3349 CCAACTTCTACACCCGTCGTGTGCTCTCAGGTGAATACCAAATGGTCAACCCTTGGTTAC 3290 Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCG 364936 || ||||| ||| || || ||| || |||||||| ||||| || | Sbjct 3289 TCCGTGATCTGGTCGATATGGGTCTCTGGAACGATGATGTGAAGAACATGATCATGGCTG 3230 Query 364937 CTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAA 364996 || ||| | |||||| | || | | || || | |||| | | ||||| | Sbjct 3229 ACGGAGGGTCTATTCAGAACGTGCCCAGCATCCCTCAAAACTTGAAAGATCTCTACAAGA 3170 Query 364997 CCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTA 365056 | || |||||||| || || ||| ||||||| ||||| || ||||| ||||| | || Sbjct 3169 CTGTCTGGGAAATCTCTCAACGTACTATCATTGACATGGCTGCTGATCGTGGTGCGTATA 3110 Query 365057 TCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACAT 365116 | || || || || ||| | || ||| || | || | || | ||||| || Sbjct 3109 TTGACCAAAGTCAAAGTTTGAACATCTTTATGGCTGAACCCAACTTTGGTAAGCTCACCA 3050 Query 365117 CCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||||| || || || ||| || || | |||||||| Sbjct 3049 GTATGCACTTTTATGGCTGGCAAAAGGGATTAAAGACAGG 3010 >seq59 Length=120760 Score = 154 bits (170), Expect = 4e-32 Identities = 397/593 (67%), Gaps = 39/593 (7%) Strand=Plus/Minus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGG 111374 ||||| || || ||||||||||| || | | |||| | | |||||||| || ||| Sbjct 9151 TTTCCCCTCCTGACAACAAAGCGTGTATTCTTCAGGGGAGTCTTGGAAGAACTGCTTTGG 9092 Query 111375 TTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGAT 111434 || || ||| |||||| |||| | || | || |||| | |||||||||||| Sbjct 9091 TTCATAAAAGGAGATACAAACTCAAAGCATCTAAGTGAAAGAAATATCAAAATTTGGGAT 9032 Query 111435 GGAAATGGATCACGTGACTTTCTAGATTCAGTT-GGTCTTG-TCGACAACGAAGAAGGTG 111492 || || || || || || | ||| || |||| |||||| || | || ||||||| Sbjct 9031 GGCAACGGTTCTCGCGAATATCTCGACA-AGTTAGGTCTTACTCACCGTCGT-GAAGGTG 8974 Query 111493 ATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTAC-AAAACCATG 111551 | || |||||||||||||||||||||||| | |||||||| || | ||| || || Sbjct 8973 ACCTTGGACCAGTTTACGGATTTCAATGGAGACACTTTGGCGCCAAGTACGTTGACTGTG 8914 Query 111552 CACGACTCA-TATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATTAA 111610 || ||| | ||| ||| || |||||||||||| | || |||||| || || Sbjct 8913 -AC-ACTGATTATACAGGACAAGGCGTTGATCAATTACAACAAGTGATTGATACTATAAA 8856 Query 111611 GAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCA---TTGGA 111667 ||||| || ||| ||| | || ||| | ||||||||||| |||| | Sbjct 8855 AAACAATCCCACTGATCGCAGAATCATTCTATCAGCATGGAACCC---TGCAGATATTCC 8799 Query 111668 AAAAATGGCACTTCCACCATGTCAT--CTTATGTGCCAGTTTTATGTA-------CACGA 111718 | ||||| | ||||| |||||| ||| ||| |||||||||||| ||| Sbjct 8798 TATCATGGCTTTACCACCTTGTCATGCCTTTTGT--CAGTTTTATGTATCTAACCCACCT 8741 Query 111719 CGGGAT-GCTTTCATGCCAA-------------ATGTATCAGCGATCTGCTGATATTGGT 111764 | |||| || | |||||| | ||||| || ||| ||||| || Sbjct 8740 CAGGATGGCGGGCGTGCCAAGTTATCCTGTGTGCTCTATCAACGTTCTTGCGATATGGGA 8681 Query 111765 CTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTT 111824 || |||||||| || |||||||| ||| ||||| | || || | || || ||| | Sbjct 8680 CTGGGTGTTCCTTTCAATATTGCTTCTTATGCACTTTTGACACGCATGATTGCACATGTA 8621 Query 111825 ACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTA 111877 ||| |||| |||| ||||||||||| || || || ||| | |||||||| Sbjct 8620 ACAGATCTTGAACCTGGTGAATTCATACATACAATGGGCGATACACATGTTTA 8568 >seq106 Length=79482 Score = 134 bits (148), Expect = 4e-26 Identities = 414/633 (65%), Gaps = 17/633 (3%) Strand=Plus/Minus Query 22291 CCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACA 22350 || || || | |||||||||||| | ||||| ||||||||||| ||||||| ||||| Sbjct 37744 CCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTGAAAACATTCACGCAGAAACT 37685 Query 22351 TATTCTATGATGCTACAGTCACTCGTAG--AAGATAAAGACGAACAACGAAA--CTTATT 22406 || | | || | | |||| || ||||||| | || || |||| || || Sbjct 37684 TACAGTCTTTTGATTGA--CACTTATATCAAAGATAACCAAGAGAAA-GAAATGCTCTTT 37628 Query 22407 CCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGAT 22466 | || ||| ||| || | | || |||| ||||| |||||||| | || ||||| Sbjct 37627 TCT-GCTATTGACACTATCCCTTGTATCAAGAGAAAGGCTGATTGGGCCTTCAAGTGGAT 37569 Query 22467 GAACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTT 22526 | | |||| || || || || ||| |||| ||||||| || ||||| || || Sbjct 37568 TTCCTCAAACGGTTCCTTTGCTGAGCGCCTTGTTGCCTTTGCTGCTGTCGAAGGTATCTT 37509 Query 22527 CTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCT 22586 ||| ||||| | ||| | | ||||||||||| || ||||||| | ||||| ||| | Sbjct 37508 CTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAAGAAACGTGGTTTGATGCCCGGTTT 37449 Query 22587 AACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTAT 22646 || || ||||| || || | || ||||| ||||||||||| || ||||| ||| | Sbjct 37448 GACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTCATACTGACTTTGCTTGTCT 37389 Query 22647 GCTATATCGGAATCATATCATTCATAAACTTCC---ATATGAAACTGTACTTGATATTAT 22703 ||| | | || | ||| ||| | ||| | ||| || ||||| || Sbjct 37388 TTTATTT---ACCCA---CCTTCGTAAGCGTCCTAGCCAAGAACGCGTCAAGGATATCAT 37335 Query 22704 TACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCAT 22763 | || || |||||| |||| | || || | || || |||||| Sbjct 37334 CTTGGAAGCTGTCAGCATTGAACAAGAATTTTTGACGGATGCTCTTCCCGTTGCTCTCAT 37275 Query 22764 TGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAAT 22823 ||| || ||| | | | ||| || ||| ||| |||| ||||| |||||||| | | Sbjct 37274 TGGCATGAATTCTGCCTTGATGTGTCAATACATTGAATTCGTTGCTGATCGTCTCATGGT 37215 Query 22824 TTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTAT 22883 | | || || | | ||| ||| | | |||||||||||| | ||||| | || Sbjct 37214 TGCTCTTGGGTTCGACAAGATTTACATGGCTACTAATCCATTTGACTTTATGGACATGAT 37155 Query 22884 TTCACTTGAAGGAAAGACCAATTTCTTCGAAAA 22916 || || |||| |||||||| ||||| ||||| Sbjct 37154 CTCTCTCCAAGGCAAGACCAACTTCTTTGAAAA 37122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303344248437920