Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq109 134 1e-26 seq11 111 1e-19 seq91 102 7e-17 seq165 95.1 1e-14 >seq109 Length=78937 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || ||| | |||||||| | ||||| | |||||||| | Sbjct 18520 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTCGAATCTTCT 18461 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || |||||||||||| ||||| ||||| || ||||| |||||| Sbjct 18460 GACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 18401 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | || || ||||||||||||| | | | | ||||| |||||| Sbjct 18400 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAAC 18341 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| |||||||| |||| || || Sbjct 18340 ATTCAAAAGGAATCTACTCTTCACTTGGT 18312 >seq11 Length=236632 Score = 111 bits (122), Expect = 1e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 24036 GAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGC 24095 ||||||||| || || | ||||| | ||||| |||||||| ||||| ||||| Sbjct 1 GAAGTCGAGTCCTCTGATAGTATCGAAAATGTCAAGCAAAAGATCCAAGACAAGGAAGGT 60 Query 24096 ATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC 24155 || ||||| |||||||| | || |||| || ||||||||| |||||||||| | | Sbjct 61 ATCCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGTCGTACT 120 Query 24156 GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 | || ||||| ||||| |||||||||||||| |||| || || Sbjct 121 TTGAGTGATTACAACATCCAAAAAGAATCTACTCTTCACTTGGT 164 >seq91 Length=92626 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||||| || || ||||| || ||||| |||||| Sbjct 70128 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 70069 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| || ||| || ||||||||||| | | | | | || ||||| ||| Sbjct 70068 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 70009 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| |||||||| |||| || || Sbjct 70008 ATTCAAAAGGAATCTACCCTTCACTTGGT 69980 >seq165 Length=49949 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||| || | ||||| ||||||||| ||||| ||||| || ||||| || || Sbjct 37995 CGACACCATTGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCA 37936 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || || | | ||| || ||||||||||| | | | | | ||||| || || Sbjct 37935 ACAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGCGACTACAA 37876 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| ||||| |||||||| | || ||||| Sbjct 37875 CATCCAAAAGGAATCTACTCTCCACTTAGT 37846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933065686800