Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208
3745.1_202017-04-12] 560 sequences; 24,950,816 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq70 443 3e-119
seq106 262 5e-65
seq53 116 5e-21
>seq70
Length=105670
Score = 443 bits (490), Expect = 3e-119
Identities = 1377/2115 (65%), Gaps = 40/2115 (2%)
Strand=Plus/Plus
Query 61880 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 61939
||||| || || ||||| || || |||| || ||| || ||||| ||||||||
Sbjct 2992 GTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAGCCATAAAAGTGCATACTG 3051
Query 61940 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 61999
|| || || | | | || || || ||| ||| |||| | ||||||||| || ||
Sbjct 3052 GTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATA 3111
Query 62000 AAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTT 62059
| || || | || |||||||| | || || || ||| | |||||||| | |||
Sbjct 3112 TACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACAGTC 3171
Query 62060 TTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATGGATCCACCATCT 62116
|| || | || | || | | ||| | | | | |||||||| || || || ||
Sbjct 3172 TTGTAGAGATCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGACCCTCCGTCA 3231
Query 62117 GCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 62176
||||| ||| | ||||| | ||||| ||||| | | ||| | | | | ||
Sbjct 3232 GCCATGATCATGTTCTTCACATCATCGTTCCAGAGACCCATATCGACCAGATCACGGAGT 3291
Query 62177 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 62236
| || || || | ||| |||| || || | || | || ||||| | ||
Sbjct 3292 AACCAAGGGTTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGTTGGAT 3351
Query 62237 GTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 62296
|| || ||||| | | | ||||| || | ||||||| ||| || ||||| ||||||
Sbjct 3352 GTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATA 3411
Query 62297 GGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTT 62354
|| || |||| | | || | | ||| ||| | | || || || || || |
Sbjct 3412 GGAGCAACCAGCAGAGAGTTGCGGACACC--ATGCTTAGCAATCTTTTCCTTGAGTGCGG 3469
Query 62355 CCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT-- 62412
|||| | ||| || | | ||| || ||| || ||||| ||
Sbjct 3470 CCCAGTCCCAGAGGTTGGTAGGTGTGACATTCCACATGTCATATTGCAGGATACCCTTGG 3529
Query 62413 --ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAA 62470
|| || | | || |||| || ||||| ||||| | ||| ||||| | || ||
Sbjct 3530 ACACAGGGCTGC----CTTCATAGGTTTCGTAAGGTCCATACTTTTCAGCCAACTCGCAG 3585
Query 62471 CTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGCGC 62529
|| || | ||| | | || |||||||| ||||| | | || | | |||| ||
Sbjct 3586 GAGGCTTCCAGGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GC 3644
Query 62530 TTCCAGGCTATCAAATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACAC 62588
||| | ||| ||||||||| ||||| || || | ||| ||||| ||||||||||
Sbjct 3645 TTCAGGTGAATCGAATGGATAACG-AAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACAC 3703
Query 62589 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 62648
| | ||| || ||||| |||||||| || || |||| ||||| | |||||| ||||
Sbjct 3704 CTAAACCAATCGGTCTGTGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAAT 3763
Query 62649 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGA 62708
| ||||| || || || || | ||||| || || ||| ||||| | ||||||
Sbjct 3764 TGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTT 3823
Query 62709 GAAAATCAAA---TCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTAC 62765
| |||||| | | | || || ||| | | || |||| || |||| ||||
Sbjct 3824 GGAAATCATACTTTTCTCTATTGATCACATAGGTAGGCAGAGCAATGGAGGCCAAGTTAC 3883
Query 62766 AAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACT 62825
| || || || |||| || | || |||| | || || || || ||||| || ||||
Sbjct 3884 AGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTACACAGATTGCTGCACT 3943
Query 62826 TGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGA 62885
|||| || || || ||||| |||||||||||| ||||||| ||||||||||| || ||||
Sbjct 3944 TGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGA 4003
Query 62886 ATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA 62945
||||| | || || || | |||| ||| | ||| || | ||| | | ||||||| |
Sbjct 4004 ATGGATTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGCCTTGA 4063
Query 62946 TTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTC 63003
| | | | || ||||| ||| | ||||||| | ||| | | ||||||||
Sbjct 4064 TCGTT--TCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACTCGTC 4121
Query 63004 TCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC 63063
||||| | | | | ||||||| |||| ||||| | || ||||| || || |
Sbjct 4122 ACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGACCAATCACCACC 4181
Query 63064 ATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGG 63122
|| | || || | ||| || |||||||||||||| ||||| ||| || ||||| | |
Sbjct 4182 GTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGC-ATAGAACAGATCACGAG 4240
Query 63123 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63182
|| ||| || || || || ||| | || | || | | ||| || | ||
Sbjct 4241 CCCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGTAAAAATGTCTGCAT 4300
Query 63183 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63242
|||| ||||||||||| || || | | || || || || || || || ||||| | |
Sbjct 4301 GCCAAGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCACCTTGATCGACAT 4360
Query 63243 ATCTAGCGGTGTTATTATAAACTCTCAACATTGG-AATAATACCATTGGATGTACCATTG 63301
| | ||| || || || |||| | | ||| || || ||| || ||||| ||| |||
Sbjct 4361 AACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAAT-CCGTTGGAGTAACCGTTG 4419
Query 63302 GTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63361
|| || | || || |||||| |||||||| || ||| || || || || |||
Sbjct 4420 GTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAAGCCAATACCGCCT 4479
Query 63362 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 63421
|| | || |||||| || || ||| | ||| |||||||| || || || |||
Sbjct 4480 GCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCT 4539
Query 63422 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 63481
|| ||||| | || | || || |||||| ||| ||||| || || |||||||||
Sbjct 4540 TCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTGCATTAAAT 4599
Query 63482 AAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 63541
| |||||| |||||| ||||| || |||| || | | ||||| ||||||||||||
Sbjct 4600 AGAGTAGGACTAGCGTGTGTAAAGTATCTTTCGGACATCAAGTTGTATGTCTCAATAGCT 4659
Query 63542 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63601
| || ||||| | ||| || || | || |||||||| | || |||||||| | |
Sbjct 4660 GCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGCTGAGGACGT 4719
Query 63602 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63661
|| | |||||| || || || | | ||| || || | |||||| ||||||||
Sbjct 4720 TCGGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGAGTTTTGAAACCAAAG 4779
Query 63662 TAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTT---GAGTTTATCCTTAT 63716
||||||| ||||| || || || || || || | ||||| | | | | | ||||
Sbjct 4780 AAGTTGTACTTGAAA--TCACGGTCATAGATGATGGCAGAGTTCAAGCGGTCAGCGTTAT 4837
Query 63717 ATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAG 63776
|| |||| | | || | | || || || || | ||||| || | || |
Sbjct 4838 CCATGACAACTTTGTAC---GTTTCATTAGAGATCATGGGTGAGTGTTTGCCTGTCTTGG 4894
Query 63777 GATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGT 63836
|||| ||||| ||| | || || || || |||| | ||| | ||||| ||||| ||||
Sbjct 4895 GATTCACATAATTGTACAAGTCTTCAATTACTTGAGAAAAGACCTTTTTGGTTTCCTTGT 4954
Query 63837 GTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTAC 63896
| ||||| || | ||| || | || || | | |||||||| ||||| | || ||
Sbjct 4955 GAAGATTAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTGGTCA 5014
Query 63897 AAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATA 63956
| || ||| |||| || || || | || | ||| || ||||| ||||| | ||||
Sbjct 5015 TATAAGCAGCTGTTTCTGCAGCAAGGTTATCGAGTTCGACAGTTGTAACACCTTGGTATA 5074
Query 63957 TTCCTTGGATAACCT 63971
|| ||||||||
Sbjct 5075 CACCAGAGATAACCT 5089
>seq106
Length=79482
Score = 262 bits (290), Expect = 5e-65
Identities = 565/837 (68%), Gaps = 17/837 (2%)
Strand=Plus/Plus
Query 32385 ACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAAT 32444
||||| ||||| || || || || || |||| | || || | ||||| || || |||
Sbjct 37116 ACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATGTCCATAAAGTCAAAT 37175
Query 32445 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACA 32504
||||| ||| | | ||||| || | || || | || || | | ||| || ||
Sbjct 37176 GGATTAGTAGCCATGTAAATCTTGTCGAACCCAAGAGCAACCATGAGACGATCAGCAACG 37235
Query 32505 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 32564
||||| || ||| ||||| || ||||||| || || || ||| ||||||||
Sbjct 37236 AATTCAATGTATTGACACATCAAGGCAGAATTCATGCCAATGAGAGCAACGGGAAGAGCA 37295
Query 32565 ACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCT 32624
| || | ||||||||||||||| ||| || || || ||| | || ||||
Sbjct 37296 TCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATCCTTGACGCGTTCT 37355
Query 32625 TCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACC 32683
| || || | | || | | || |||| | | ||| || || || || |||||
Sbjct 37356 TGGCTAGGACGCTTACGA-AGGTGGGTAAATAAAAGACAAGCAAAGTCAGTATGAAGACC 37414
Query 32684 CTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 32743
|| || | || || ||||| ||| || || | |||||||| | ||||| || ||
Sbjct 37415 TTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAAACCACGTTTCTT 37474
Query 32744 AAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803
|||||||| ||||| ||||| || ||||| ||||| || ||||| || || ||||||||
Sbjct 37475 GAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGC 37534
Query 32804 AATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTA-TCCACTTTTGAGCCCAATCGG 32859
|| ||| | ||| || | |||| | | | | | ||||||| |||||||| |
Sbjct 37535 AACAAGGCGCTCAGCAAAGGAACCG----TTTGAGGAAATCCACTTGAAGGCCCAATCAG 37590
Query 32860 CCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTAC 32919
|||| | || | |||||| || || || |||||| |||||| | ||| || |
Sbjct 37591 CCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTTCTCTTGGT 37650
Query 32920 TATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGG 32979
||||||| | ||| || |||||||||||||| || |||| | ||||||||||||||
Sbjct 37651 TATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATGTTTTCAATCA 37710
Query 32980 CCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTT 33039
|||||||| || ||||| ||| |||| || | ||||| ||||| |||||| |||
Sbjct 37711 TGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCACAAAA--GTT 37768
Query 33040 CTG--CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTT 33097
|| | || |||||||| || || || || | ||||| || ||||| ||| |
Sbjct 37769 TTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCAAGACACGAGA 37828
Query 33098 TATAAAATATTTTTCGTCTGGTGTTAGTTTATT---CCAATCATTGATATCTTTAGATAT 33154
||||| | ||| | | || | ||| || |||||||| | ||| || |
Sbjct 37829 GATAAAGAAACGTTCATTTTCGGTCATTTTGTTTTCCCAATCATGAAGATCCTTGCTCAA 37888
Query 33155 ATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211
||| | |||||| |||||||||| || || || || |||||||| | | ||||||
Sbjct 37889 ATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTTTTATAGAATTGCCAGAT 37945
>seq53
Length=125223
Score = 116 bits (128), Expect = 5e-21
Identities = 278/420 (66%), Gaps = 3/420 (1%)
Strand=Plus/Minus
Query 61888 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 61947
||||||||| || || ||||| || |||| | ||||| |||||| || | |||
Sbjct 93110 ATAGTACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAAGTCAATTT 93051
Query 61948 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62007
| | | | || || || || | ||||||||||||| |||||| || ||||||||
Sbjct 93050 GCCAAAGTTTGGTTCGGCAGTAAATAAATTCATAGATTGAGATTGATCAATAAAGGCTCC 92991
Query 62008 CCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 62067
|| || || ||||| | ||||| || |||||| ||| ||||| | || || || |
Sbjct 92990 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCACACGGTCTTGTATAG 92931
Query 62068 TCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAAT 62124
| || | ||| || |||| | | || ||| || || |||| || || ||
Sbjct 92930 TTTTTTGAGATCATCAGGAATGCCAGGAATACGCTGGATACTACCGCCATGAGCGATCAT 92871
Query 62125 CCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGG 62184
| | |||||||| | |||||||||||| | || | | | | | | | |||| |
Sbjct 92870 CATGTTCTTGATGTTATCATTCCATAAATCGAGTTCAATGAGATCATTCAATAAATGCTG 92811
Query 62185 ATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGG 62244
|| |||| ||| ||||| || || | || || |||||||| || || || ||
Sbjct 92810 GTTGACTATTTGGAATTCACCGCTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 92751
Query 62245 TTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 62304
|| | | || ||||| ||||| |||||| ||| ||||| |||||||| || ||
Sbjct 92750 CTCGAAGCATTCGTTATTACCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 92691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633627564576000
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