Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq106 223 4e-53 >seq106 Length=79482 Score = 223 bits (246), Expect = 4e-53 Identities = 601/910 (66%), Gaps = 36/910 (4%) Strand=Plus/Plus Query 92743 TAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACAT 92802 |||||||| || |||| ||||| || ||| || | ||| ||||| |||||| Sbjct 37041 TAGAAATCAGCGTCTAAGGTAAAGGTCTTTTCAGCAGGCTGCTTGTTCATGACACCAGCA 37100 Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862 ||| || || || ||||||||||| || ||||| |||| | ||| ||| Sbjct 37101 CGTTGATAATCGGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATG 37160 Query 92863 TTCACTA-GTGAT-TGGATTCTTGGCGTTATAATACTTTTC--ACC---GATCAACTCGT 92915 | || | || | |||||| | || | ||| ||| || ||| || |||| Sbjct 37161 TCCATAAAGTCAAATGGATTAGTAGCCATGTAAATCTTGTCGAACCCAAGAGCAAC---- 37216 Query 92916 ACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTA 92975 || | | |||||| || ||||| ||||| ||| ||||||| || ||||||| || | Sbjct 37217 -CATGAGACGATCAGCAACGAATTCAATGTATTGACACATCAAGGCAGAATTCATGCCAA 37275 Query 92976 GAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCA 93035 ||| || || ||||| || ||||| || |||| || || || ||||| | Sbjct 37276 TGAGAGCAACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGA 37335 Query 93036 AGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCAC- 93094 ||| || | || | | || | | | ||||| | ||| || || || Sbjct 37336 TGATATCCTTGACGCGT-TCTTGGCTAGGACGCTTACGA-AGGTGGGTAAATAAAAGACA 37393 Query 93095 -GCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACC 93153 |||||||| ||||| | |||||| || || | ||||| |||||||||||||| ||||| Sbjct 37394 AGCAAAGTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACC 37453 Query 93154 TGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTAT 93213 || | || || ||||||||||||||||| || |||||||| |||||| || || || Sbjct 37454 GGGCATCAAACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGAT 37513 Query 93214 ACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA------ATTTGCGGAATTACT 93267 |||||| || || ||||| || |||| || || ||||| |||| |||| Sbjct 37514 ACCTTCGACAGCAGCAAAGGCAACAAGGCGCTCAGCAAAGGAACCGTTTGAGGAA----- 37568 Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 ||||| || || |||||||| || ||| |||| |||||||| | || || ||||| Sbjct 37569 ----ATCCACTTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGC 37624 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 ||| || ||| ||| | |||| || || || || || || ||| || Sbjct 37625 AGAAAAGAGCATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTA 37684 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 |||| | || | || || || ||||| || || ||||||||| ||||||| | Sbjct 37685 AGTTTCTGCGTGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGG 37744 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 |||| ||||| | | |||| | | || | |||||||| || || ||||| || | Sbjct 37745 AATCTTGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACC 37804 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATA---AAATGTTTCTCATC-ATCTTTAAGCTTAT 93563 ||||| || ||||| | | | ||| ||| ||| | || || || | || | Sbjct 37805 AGCAAAGAAGGCCAAGACACGAGAGATAAAGAAACGTTCATTTTCGGTCATTTTG-TTTT 37863 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||||||| ||||| || | ||||| |||||| | |||||||| || ||||| | Sbjct 37864 CCCAATCATGAAGATCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAG 37923 Query 93624 CTTTTTTGTA 93633 ||||||| || Sbjct 37924 CTTTTTTATA 37933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856901974400