Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq109 131 1e-25 seq165 118 9e-22 seq91 105 6e-18 seq11 104 2e-17 >seq109 Length=78937 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || || | ||| | ||||| ||| | | Sbjct 18520 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTCGAATCTTCT 18461 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | |||||||| |||||||||||||| |||||||| || |||||| Sbjct 18460 GACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 18401 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| || ||||| | || ||| || ||| | ||| || ||| Sbjct 18400 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAAC 18341 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| ||||| || Sbjct 18340 ATTCAAAAGGAATCTAC 18324 >seq165 Length=49949 Score = 118 bits (130), Expect = 9e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| ||| | ||| | |||| ||||| |||||||||||||| |||||||| || || | Sbjct 37996 CCGACACCATTGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACC 37937 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 ||||||||||||| |||||||| ||||| | || || || ||| | ||| |||| Sbjct 37936 AACAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGCGACTACA 37877 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| ||||| ||||| || | || |||||| | || | || || ||| Sbjct 37876 ACATCCAAAAGGAATCTACTCTCCACTTAGTTCTCCGTCTTCGTGGTGGT 37827 >seq91 Length=92626 Score = 105 bits (116), Expect = 6e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| ||||| || ||||| ||||| ||||| || || |||||| Sbjct 70128 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 70069 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || ||||| ||||| | || || || ||| | ||||||||| Sbjct 70068 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 70009 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| ||||| ||| | || || ||| | || | || || ||| Sbjct 70008 ATTCAAAAGGAATCTACCCTTCACTTGGTTCTCCGTCTTCGTGGTGGT 69961 >seq11 Length=236632 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 22264 GAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGT 22323 ||||| || || | |||| | || || |||| ||||| || ||||||||||| ||| Sbjct 1 GAAGTCGAGTCCTCTGATAGTATCGAAAATGTCAAGCAAAAGATCCAAGACAAGGAAGGT 60 Query 22324 ATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACC 22383 || || || |||||||||||||| || || |||||||| ||| | || ||| || || Sbjct 61 ATCCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGTCGTACT 120 Query 22384 GTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 | ||||||||||| ||||||||||| || Sbjct 121 TTGAGTGATTACAACATCCAAAAAGAATCTAC 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725135356400