Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq109 159 3e-34 seq165 143 2e-29 seq91 127 2e-24 seq11 118 9e-22 >seq109 Length=78937 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | |||||||| ||||||||||| || ||| Sbjct 18291 ATACCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCG 18350 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | |||||| |||||| |||||||||||||| |||||||||| ||||| || ||| Sbjct 18351 CTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGA 18410 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||||||||||| | || | ||||| | |||||| Sbjct 18411 GGAATACCTTCCTTGTCTTGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCG 18470 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | || || || || || || || ||||| || |||||| Sbjct 18471 ACTTCTAAAGTAATTGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATG 18521 >seq165 Length=49949 Score = 143 bits (158), Expect = 2e-29 Identities = 135/172 (78%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | |||||| || | |||||||| ||||| |||||||| ||| Sbjct 37825 ATACCACCACGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCG 37884 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| |||||| ||||| ||||||||||| || |||| ||||| |||||||| ||| Sbjct 37885 CTCAAGGTACGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGA 37944 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGG 114324 ||||| ||||| ||||| ||||||||| || | | |||| |||||||| Sbjct 37945 GGAATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGG 37996 >seq91 Length=92626 Score = 127 bits (140), Expect = 2e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | |||||||| ||||||||||||||||| Sbjct 69959 ATACCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCA 70018 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| |||||| ||||| ||||||||||| ||| | |||||||| ||||| || ||| Sbjct 70019 CTCAAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGA 70078 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTC 114322 || || ||||| || || |||||||| || | | |||| |||||| Sbjct 70079 GGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTC 70128 >seq11 Length=236632 Score = 118 bits (130), Expect = 9e-22 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||||||||| || | | || || || | |||||||||||||| ||||||||||| || Sbjct 183 ACCGCCACGAAGACGAAGGACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCACT 124 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||||||| |||||| || || || || ||| | |||||||| ||||| || ||||| Sbjct 123 CAAAGTACGACCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGG 64 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || ||||| ||||| |||||||| || | | ||| | | || | ||| ||||| Sbjct 63 GATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTTTCGATACTATCAGAGGACTCGAC 4 Query 114335 GTC 114337 || Sbjct 3 TTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131532582720