Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq70 125 1e-23 seq106 96.9 7e-15 >seq70 Length=105670 Score = 125 bits (138), Expect = 1e-23 Identities = 721/1151 (63%), Gaps = 37/1151 (3%) Strand=Plus/Plus Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359 |||||||||| | ||||| | |||||| || |||||||| || ||||| ||| || Sbjct 3501 CCACATGTCATATTGCAGGATACCCTTGGACACAGGGCTGCCTTCATAGGTTTCGTAAGG 3560 Query 244360 ACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAA 244419 || | | |||| || ||| | || ||||| || | ||||||||| || || Sbjct 3561 TCCATACTTTTCAGCCAACTCGCAGGAGGCTTCCAGGGCAGCATGGTAGATGGTTTCAAA 3620 Query 244420 GATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCAT-----C 244474 ||| |||||| | || | || |||||||| | ||| | | | Sbjct 3621 GATTTGAATGTTCAACT-----GCTTGGCTTCAGGTGAATCGAATGGATAACGAAGAGCC 3675 Query 244475 ATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAG 244534 ||||| |||||| | || || || || | || || |||||||||| ||||||||| Sbjct 3676 ATGAAAGTGTCGGCTAAGCCTTGAACACCTAAACCAATCGGTCTGTGTCTCTTGTTGGAT 3735 Query 244535 CGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTG 244594 | ||||||| || || || | ||| ||||| | |||||| | ||| | ||| Sbjct 3736 CTTTCGGCTTCGATGACAGGATAGTAATTGATATCGATGATCTTGTTCAAGTTTCTAGTG 3795 Query 244595 ATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATG 244654 || | | || ||| ||| || || || |||| | ||| || Sbjct 3796 ATAACCTTGGTAACATCGTGCAGTTTTTGGAAATCATACTTTT-------CTCT---AT- 3844 Query 244655 GTGATCCTCACAAACTCGTTG--AGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCT 244712 ||||| ||| | || | || || | | ||||| ||| ||||| || || || | Sbjct 3845 -TGATC---ACATAG--GTAGGCAGAGCAATGGAGGCCAAGTTACAGACAGCGACTTCAT 3898 Query 244713 CCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGT 244772 | | | | ||| | ||||| || || || || || ||||||||||| || |||| || Sbjct 3899 CAGGACTCGAGTATTCAACAATTTCTGTACACAGATTGCTGCACTTGATCGTACCCAAGT 3958 Query 244773 GCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCT 244832 || ||||| ||| ||| || || ||||| ||||| ||||| || || |||| Sbjct 3959 TTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAATGGATTGCCTGTCT 4018 Query 244833 CGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892 | || || | | | | | ||| || | |||||||| ||| | ||| Sbjct 4019 CCGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGCCTTGATCGTTTCTCTAGCTC 4078 Query 244893 TGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTA 244952 | || || ||||| || || || | |||||| ||||||| || | || Sbjct 4079 TTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACTCGTCACCCCAGATTTCATGTA 4138 Query 244953 GGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCA 245012 || || | || || | ||| ||| || || ||||| |||| | ||||| Sbjct 4139 ATCCAGGAGCCTCATTGGGACAAAACAGAGACCAATCACCACCGTCTCTGACACGCTGCA 4198 Query 245013 TGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGC 245072 |||| || || || |||||||| || | ||| || || | | ||| ||||| || Sbjct 4199 TGAAAAGATCAGGAATCCAGAGAGCATAGAACAGATCACGAGCCCTGATTTCGTCTTTGC 4258 Query 245073 CAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGA 245132 || ||| || | || || |||||| ||| | ||| | ||||| || |||| ||| | Sbjct 4259 CAAAGTTTTTTCGCAAGTCTAAAAAGGTAAAAATGTCTGCATGCCAAGGTTCCAAGTACA 4318 Query 245133 CAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGC----G 245188 |||| ||||| || ||||| || || || || || || | ||||| | Sbjct 4319 TTGCGAATGCGCCCGGACGCTTATTACCACCTTGATCGACA----TAACGAGCCGTATTG 4374 Query 245189 TTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAG 245248 ||||| | || || | |||| | ||||| |||| ||||||||||| ||||| Sbjct 4375 TTGAAAACACGTAGCATGGGCAACAATCCGTTGGAGTAACCGTTGGTGCCGGCAATGTAT 4434 Query 245249 GCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATG 245308 | || | | | | |||| ||| | ||| | ||||| || ||||||||| Sbjct 4435 GATCCACTAGCACGAATGTTGTGAATGTTTAAGCCAATACCGCCTGCTGTCTTGGAGATT 4494 Query 245309 AGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGC 245368 | || ||| | |||| || || || || || || || |||||| ||||| Sbjct 4495 TGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTCTTTCATGGTGAGC 4554 Query 245369 AGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCG 245428 | ||||| || |||| |||||| || ||| | || || ||||| || || ||| Sbjct 4555 AAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTGCATTAAATAGAGTAGGACTAGCG 4614 Query 245429 TGGGTAAAGTA 245439 || |||||||| Sbjct 4615 TGTGTAAAGTA 4625 >seq106 Length=79482 Score = 96.9 bits (106), Expect = 7e-15 Identities = 348/535 (65%), Gaps = 22/535 (4%) Strand=Plus/Minus Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677 || || || || || || || ||||||| ||||| || ||||| |||| ||||| Sbjct 37624 GCTATTGACACTATCCCTTGTATCAAGAGAAAGGCTGATTGGGCCTTCAAGTGGATT--- 37568 Query 42678 AGTCCCGA--CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCT 42735 ||| | || | || | ||| | || || |||||| | || ||||| || |||| Sbjct 37567 --TCCTCAAACGGTTCCTTTGCTGAGCGCCTTGTTGCCTTTGCTGCTGTCGAAGGTATCT 37510 Query 42736 TCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTG--TCGATGCCCGG 42793 ||||||| || |||| || |||||||| ||||||||| || ||| | ||||||||| Sbjct 37509 TCTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAAG--AAACGTGGTTTGATGCCCGG 37452 Query 42794 ACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTG 42853 | || ||| || ||| | ||| | | || || || || |||| |||||||| || Sbjct 37451 TTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTCATACTGACTTTGCTTG 37392 Query 42854 CCTCCTGTTCTCGAGCCACCTCAGGCACAAGC--CCTCG-AAGGAGCGGGTCCGGGCCAT 42910 || || | | |||||| | |||| ||| | | || || ||| || || Sbjct 37391 ---TCTTTTATTTACCCACCT---TCGTAAGCGTCCTAGCCAAGAACGCGTCAAGGATAT 37338 Query 42911 CATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCT 42970 |||| ||| || || || || | || || | ||| | | || ||||| | || Sbjct 37337 CATCTTGGAAGCTGTCAGCATTGAACAAGAATTTTTGACGGATGCTCTTCCCGTTGCTCT 37278 Query 42971 GGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT 43030 | |||||||| | | | ||||| | ||||| | | ||| || || | |||| | Sbjct 37277 CATTGGCATGAATTCTGCCTTGATGTGTCAATACATTGAATTCGTTGCTGATCGTCTCAT 37218 Query 43031 -GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGA 43089 || | ||||| || | | |||| | | || || ||||||||||| | Sbjct 37217 GGTTGCTCTTGGGT-TCGACAAGATTTACATGGCTACTAATCCATTTGACTTTATGGACA 37159 Query 43090 ACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||| | | |||||||||||||| || || ||||| ||| |||| || || Sbjct 37158 TGATCTCTCTCCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCCGATTATCA 37104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944332589625600