Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq106 114 3e-20 seq251 93.3 1e-13 >seq106 Length=79482 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 || || |||||| | | | ||| |||||| || |||||||| ||||||||| || | Sbjct 37276 ATTGGCATGAATTCTGCCTTGATGTGTCAATACATTGAATTCGTTGCTGATCGTCTCATG 37217 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 || || || | || || | |||| | | ||||| || | ||||||||| | Sbjct 37216 GTTGCTCTTGGGTTCGACAAGATTTACATGGCTACTAATCCATTTGACTTTATGGACATG 37157 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCT 269331 || || ||| |||| ||||| |||||||| |||||||||||| ||| ||||||||| || Sbjct 37156 ATCTCTCTCCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCCGATTATCAACGTGCT 37097 Query 269332 GGTGTAATGAA 269342 ||||| ||||| Sbjct 37096 GGTGTCATGAA 37086 >seq251 Length=24034 Score = 93.3 bits (102), Expect = 1e-13 Identities = 209/309 (68%), Gaps = 4/309 (1%) Strand=Plus/Minus Query 325967 ATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACA-GCT 326025 ||||| ||||| |||| | | |||||| ||||| || ||||| ||||||||| | Sbjct 13559 ATAGGTGTGATAAACTCCAAGAGGAACCCAGGAATATCCAGAAGCG-AGGGAAACATGGA 13501 Query 326026 ATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCAT 326085 || || |||||| |||| ||||| |||||| | |||||| ||| || ||||| Sbjct 13500 ATCGATAAAGTTGATGATCAGACCCTTAATGTGTGAACCGTCATGATCTTGATCTGTCAT 13441 Query 326086 GATCATCACATGACCGTAACG-AAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 326144 |||||||| | | || || || || | | | || ||| |||||| |||| Sbjct 13440 GATCATCAAACGGCCATATCGCAACTCATCAACACT-TTCATACTTTTTACCATGCTGAA 13382 Query 326145 GGCCGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACGGATG 326204 |||| ||||| |||| | |||||||||| || ||| ||| || || Sbjct 13381 GGCCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTTTTCATGAGTTCAGCATTAGAAA 13322 Query 326205 CATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCGA 326264 | || || |||||||| ||||| ||||| | ||||| || ||||| || ||||| | Sbjct 13321 CGTCACGAACGTTCAACAGTTTGCCACGGATGGGGAATACACCATAGTAGTCACGACCCA 13262 Query 326265 CCACGGACA 326273 | || |||| Sbjct 13261 CTACTGACA 13253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179645935979680