Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq70 111 2e-19 >seq70 Length=105670 Score = 111 bits (122), Expect = 2e-19 Identities = 416/646 (64%), Gaps = 10/646 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||||| ||||||||||| ||| || ||||| |||||||| || ||| Sbjct 4790 AAGTACAACTTCTTTGGTTTCAAAACTCTCGAGCGTTCTTACCTTCTCAAGATTGACGGC 4731 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || |||| || || || || || | ||||| || || ||||| || || || | Sbjct 4730 AAGATTGCCGAACGTCCTCAGCATTTGATCATGCGTGTTGCGATCGGTATCCATGGAACC 4671 Query 93835 GACAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCAT 93890 || || | | | | ||| | | | || || || | | | || || ||| Sbjct 4670 GATATTGATGCAGCTATTGAGA-CATACA---ACTTGATGTCCGAAAGATACTTTACACA 4615 Query 93891 GGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT 93950 || | || || || || || || || || || || ||||||||||| || ||| | Sbjct 4614 CGCTAGTCCTACTCTATTTAATGCAGGCACACCTCGTCCCCAGATGTCTTCTTGCTTCTT 4555 Query 93951 GATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 | | || | || | || || ||| || || | || | ||||| |||||| Sbjct 4554 GCTCACCATGAAAGAAGATTCGATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCA 4495 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || || || || || || | | | ||| || | ||||| || || || Sbjct 4494 AATCTCCAAGACAGCAGGCGGTATTGGCTTAAACATTCACAACATTCGTGCTAGTGGATC 4435 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 ||||| ||| ||||| || ||||||||| | | || ||||| || || ||||| Sbjct 4434 ATACATTGCCGGCACCAACGGTTACTCCAACGGATTGTTGCCCATGCTACGTGTTTTCAA 4375 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 ||| |||| || || || || || |||||| | | | ||| | ||||| | || Sbjct 4374 CAATACGGCTCGTTATGTCGATCAAGGTGGTAATAAGCGTCCGGGCGCATTCGCAATGTA 4315 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 | || || ||||| || ||| | | || | ||| ||||||| ||| ||||| Sbjct 4314 CTTGGAACCTTGGCATGCAGACATTTTTACCTTTTTAGACTTGCGAAAAAACTTTGGCAA 4255 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || ||||| | || || ||||| ||||||||| | || || ||||| ||| | Sbjct 4254 AGACGAAATCAGGGCTCGTGATCTGTTCTATGCTCTCTGGATTCCTGATCTTTTCATGCA 4195 Query 94311 ACGCGTCGAGAAAAACTCC-GCCTGGAGTCTTTTTTGTCCCAATGA 94355 || ||| ||| | | | ||| ||| |||||||||||||| Sbjct 4194 GCGTGTC-AGAGACGGTGGTGATTGGTCTCTGTTTTGTCCCAATGA 4150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719736937600