Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq165 125 7e-24 seq109 125 7e-24 seq70 118 1e-21 seq91 107 2e-18 >seq165 Length=49949 Score = 125 bits (138), Expect = 7e-24 Identities = 129/169 (76%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | |||||| || | | || |||||||| ||||||||||||||| Sbjct 37828 CCACCACGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTC 37887 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| |||||||||||||||| | |||| ||||| |||||||| ||||| Sbjct 37888 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGA 37947 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGG 138556 |||||||| ||||| || ||||| || | | || | |||||||| Sbjct 37948 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGG 37996 >seq109 Length=78937 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||||||||| |||||||| | ||||| || |||||||||||||| | | Sbjct 18327 GATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCA 18386 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| ||||| ||||| || ||||| |||||||| ||||| || |||||||||| | Sbjct 18387 AAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTTTGTTTTACA 18446 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | || || || || | || | || || ||||| || || || Sbjct 18447 TTG-TCGATAGTGTCAGAAGATTCGACTTCTAAAGTAATTGTCTTTCCAGTAAGTGTCTT 18505 Query 138600 TACAAAAATCTGCATG 138615 ||||| || |||||| Sbjct 18506 GACAAAGATTTGCATG 18521 >seq70 Length=105670 Score = 118 bits (130), Expect = 1e-21 Identities = 422/654 (65%), Gaps = 13/654 (2%) Strand=Plus/Plus Query 153888 GGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACC 153947 ||||| | ||| ||||| | | || | |||| || ||||||| ||||| || | | Sbjct 4156 GGACAAAACAGAGACCAATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATC 4215 Query 153948 CAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGA 154007 ||||| || || | || || || ||| || || || ||| | ||| | || Sbjct 4216 CAGAGAGCATAGAACAGATCACGAGCCCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAG 4275 Query 154008 TTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTA 154067 | | | | || | ||||| || ||||| ||||| | ||| | || | || || | Sbjct 4276 TCTAAAAAGGTAAAAATGTCTGCATGCCAAGGTTCCAAGTACATTGCGAATGCGCCCGGA 4335 Query 154068 CGCTTT---CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGT 154124 ||||| || || |||||||| | || || |||||||||| || || | |||||| Sbjct 4336 CGCTTATTACCACCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGC 4395 Query 154125 TCCAGGCCGCTTGCGGTGCCGTTGGT--CG--AATTGATCTTGCTGCCGCGGGCGCGCAC 154180 || ||| | | | |||||||| || ||| || | || | || || | Sbjct 4396 AACAATCCGTTGGAGTAACCGTTGGTGCCGGCAATGTATGAT----CCACTAGCACGAAT 4451 Query 154181 TTGATGCACGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCA 154239 | || | ||| | |||||| ||||| || || ||| || || ||| ||| | Sbjct 4452 GTTGTGAATGTTTAAGCCAATACCGCCTGCTGT-CTTGGAGATTTGAGCACAGATTTTGA 4510 Query 154240 GCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACA 154299 ||||| ||||| || ||||| ||| || | | ||||||||| || ||| ||| Sbjct 4511 GCGTCTCATAGATACCTTCGATCGAATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACA 4570 Query 154300 TTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTT 154359 | || ||| | || || || ||| || || ||||| ||||| ||||| | ||| Sbjct 4571 TCTGGGGACGAGGTGTGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTAAAGTATCTTT 4630 Query 154360 GGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCG 154419 | ||||| | ||| || || || || | || ||||| || || || |||| || Sbjct 4631 CGGACATCAAGTTGTATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATCG 4690 Query 154420 CGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGAT 154479 | || ||||||| || ||||| ||||||||||| | | ||||||||| | || | Sbjct 4691 CAACACGCATGATCAAATGCTGAGGACGTTCGGCAATCTTGCCGTCAATCTTGAGAAGGT 4750 Query 154480 ATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCAT 154533 | | ||||| |||||| |||| || | ||||| | ||||| | |||| Sbjct 4751 AAGAACGCTCGAGAGTTTTGAAACCAAAGAAGTTGTACTTGAAATCACGGTCAT 4804 >seq91 Length=92626 Score = 107 bits (118), Expect = 2e-18 Identities = 126/168 (75%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | | || ||||||||||||||||| || ||| Sbjct 69962 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 70021 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| |||||||||||||||| | || ||||| ||||| || ||||| Sbjct 70022 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 70081 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTC 138554 |||||||| || || ||| ||||| || | |||| || | |||||| Sbjct 70082 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTG-TCAATGGTGTC 70128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258926163200