Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq109 111 1e-19 >seq109 Length=78937 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| ||||| || ||||| ||||| || ||||| || | | | ||||| Sbjct 18312 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCTTCG 18371 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | |||||| ||||| | || | ||| ||||| || ||||| ||||||||||| | Sbjct 18372 AGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 18431 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||||||| | || ||||| || | ||| || ||||| ||||| || || Sbjct 18432 ATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCGACTTCTAAAGTAATTGTCTTT 18491 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || ||||| |||||||| Sbjct 18492 CCAGTAAGTGTCTTGACAAAGATTTGCAT 18520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357389560799600