Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq70 122 1e-22 seq53 120 5e-22 >seq70 Length=105670 Score = 122 bits (134), Expect = 1e-22 Identities = 457/708 (65%), Gaps = 8/708 (1%) Strand=Plus/Plus Query 204884 TCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGAC 204943 || || || || || |||| || | |||||| | | |||| | ||||| ||| | Sbjct 3913 TCAACAATTTCTGTACACAGATTGCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTC 3972 Query 204944 TTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCGC 205003 || | |||||| | ||||| || | ||||| || | || ||||| | |||| | | Sbjct 3973 TTTCTGTTACAAGCATCCTTATAGAGTATGAATGGATTGCCTGTCTCCGTTTGAGCTTCC 4032 Query 205004 AGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC--CCTTGAGACT 205061 | |||| ||||| | |||||| | | | ||| | || || |||| | | Sbjct 4033 AAAATGGCATACCACAGCTTTTGAGCCTTGA-TCGTTTCTC-TAGCTCTTCCTTCACGTT 4090 Query 205062 CGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATT 205121 |||||||| || || || ||||| || ||| | | || | || ||| | Sbjct 4091 CGTATTTTTCATAGAGAGCAACAAACTCGTCACCCCAGATTTCATGTAATCCAGGAGCCT 4150 Query 205122 TTTTGGGACACATCAGAGACCACATCTG-ATCGTCTTTCACCCTCTCCATAAACAGGTCG 205180 |||||||| | ||||||||| ||| | ||||| | || | || ||| || || || Sbjct 4151 CATTGGGACAAAACAGAGACCA-ATCACCACCGTCTCTGACACGCTGCATGAAAAGATCA 4209 Query 205181 CTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTT 205240 ||||| || | || ||||||||||| ||||| ||| |||| | |||| ||| ||| Sbjct 4210 GGAATCCAGAGAGCATAGAACAGATCACGAGCCCTGATTTCGTCTTTGCCAAAGTTTTTT 4269 Query 205241 TTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCG 205300 |||||| | | | |||||| || ||||| || || || ||| || | |||| Sbjct 4270 CGCAAGTCTAAAAAGGTAAAAATGTCTGCATGCCAAGGTTCCAAGTACATTGCGAATGCG 4329 Query 205301 CCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGC 205360 || || | ||| || ||||| || || || |||| | | ||||||||| || ||| Sbjct 4330 CCCGGACGCTTATTACCACCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGC 4389 Query 205361 ATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTC 205420 || |||| || ||||||| | ||||| |||| | ||| || || ||| | Sbjct 4390 ATGGGCAACAATCCGTTGGAGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGA 4449 Query 205421 ACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTCTTGC 205480 | |||| ||| |||||| ||||| | ||||| ||| || || || || Sbjct 4450 ATGTTGTGAATGTTTAAGCCAATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTG 4509 Query 205481 AGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAAGCC 205540 || || ||||| ||| |||| ||||| || || || | || |||| |||| | Sbjct 4510 AGCGTCTCATAGATACCTTCGATCGAATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGAC 4569 Query 205541 AGCTTGGCA-AAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTG 205587 | || || | || | ||||| || | || || || || || ||||| Sbjct 4570 ATCTGGGGACGAGGT-GTGCCTGCATTAAATAGAGTAGGACTAGCGTG 4616 >seq53 Length=125223 Score = 120 bits (132), Expect = 5e-22 Identities = 148/198 (75%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 203867 ACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTAC 203926 || ||||| || ||||| |||||||||||| |||||||| ||||||| ||| | || Sbjct 93130 ACTGCAGGTCTAGATCTCAAATAGTACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAA 93071 Query 203927 ATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATG--TTCAGAGACT 203984 | |||||| |||| || ||||| | ||| || ||||| || ||| |||| ||| | Sbjct 93070 AAGTGCATAGAAGTCAATTTGCCAAAGTTTGGTTCGGCA--GTAAATAAATTCATAGATT 93013 Query 203985 GGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAA 204043 | ||| || || |||||| || | ||| |||||||| | ||||| || | || ||| Sbjct 93012 GAGATTGATCAAT-AAAGGCTCCTCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAA 92954 Query 204044 ATCTCCCACACCGTCTTG 204061 ||||||||||| |||||| Sbjct 92953 ATCTCCCACACGGTCTTG 92936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795149633913600