Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq61 212 2e-49 seq230 172 2e-37 seq109 141 4e-28 seq91 116 1e-20 seq11 107 8e-18 seq165 93.3 2e-13 >seq61 Length=119390 Score = 212 bits (234), Expect = 2e-49 Identities = 296/413 (72%), Gaps = 3/413 (1%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || ||||| | |||||||| | | ||||| ||||| || || || |||| |||||| Sbjct 29179 GGCAAGCCTAACATTCAAGTTGAACACAAAGGAGAAACCAAGACATTCACTCCCGAAGAA 29238 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || ||||| |||||||||||||||||||||||||| ||||| ||| |||| || | Sbjct 29239 ATCTCATCCATGGTTCTTACTAAAATGAAAGAAACTTCAGAATCTTATCTTGGCACTACT 29298 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||| | ||||||||| ||||| || ||||| || || ||| ||||||| ||||| || Sbjct 29299 GTTTCATCTGCAGTAATCACTGTCCCTGCTTACTTTAACGATTCACAACGTCAAGCTACA 29358 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || || ||||| ||||| |||||||| || ||||| || ||||| || Sbjct 29359 AAGGATGCTGGTACCATCGCTGGCTTAAACGTTCTTCGTATCATTAACGAGCCTACTGCC 29418 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 |||||| | || || || | ||| || | | || || || || | || | Sbjct 29419 GCTGCTATTGCCTACGG-TTTGGACAAGAAGACCAA--AGGCGAGGCCAACGTCTTGATC 29475 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 ||||| || ||||| || ||| |||| ||| | | | ||||| || || | ||| Sbjct 29476 TTTGACTTGGGTGGTGGTACTTTTGATGTCTCTCTCTTGACCATTGAGGAAGGTATCTTT 29535 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| ||||| || |||||| || || | || ||||||||| |||| || Sbjct 29536 GAAGTCAAGGCTACGGCTGGTGACACACACTTGGGTGGTGAAGATTTTGACAA 29588 Score = 167 bits (184), Expect = 9e-36 Identities = 441/663 (67%), Gaps = 24/663 (4%) Strand=Plus/Plus Query 451841 ATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAA 451900 ||| | ||||| || | || | | |||| | |||||| ||| || || | || Sbjct 29824 ATGGAGCCTGTCGAGAAGGTCCTTCGTGATGCCAAAATTGACAAATCACAAGTTCACGAT 29883 Query 451901 ATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTT-CTTA 451959 || || ||||| || || ||||| || || || || |||||| | ||| | ||| ||| Sbjct 29884 ATCGTCCTTGTTGGTGGATCTACTCGTATCCCCAAGATTCAAAAGATGGTCTCTGACTTC 29943 Query 451960 TTT--TGG--AGGAA---AACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCAT 452012 || ||| ||||| ||||| || || | || |||||||||||||| || | Sbjct 29944 TTCAATGGCAAGGAACCTAACAA--ATCTA------TTAACCCTGATGAAGCTGTCGCTT 29995 Query 452013 ATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA-TGAAAAATTAGGAGAT 452071 |||||||||| || || || || || | || ||| | | | |||||| | | Sbjct 29996 ATGGTGCTGCTGTCCAGGCTGCCATCTTGACCGGTG-ATACGTCTGAAAAGACTGACTCT 30054 Query 452072 ATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATG 452131 | || | | ||||| | ||||| || ||||| | ||||| |||||||| ||||| Sbjct 30055 CTCTTGCTTTTGGATGTCGCTCCTCTTTCACTTGGCATCGAAACCGCTGGTGGTGTGATG 30114 Query 452132 ACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAG-TCAAACATTTAGTAC 452190 || || || || || || || | ||| | ||||| || | || | | Sbjct 30115 ACACCCTTGATCAAGCGTAACACAACTGTGCCT---ACAAAGAAATCTGAGATCTTCTCT 30171 Query 452191 AGCAAG--TGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATG 452248 | | | ||||||||| || ||||| ||||| |||| |||||| |||||||| Sbjct 30172 ACCTATGCTGATAACCAGCCTGGTGTGCTCATTCAGGTGTATGAAGGTGAACGTGCTCGT 30231 Query 452249 ACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGG 452308 ||| |||||||| || || ||||| || | ||||| ||| || | Sbjct 30232 ACAAAGGATAATAACCTTCTTGGCAAATTTGAGCTCACGGGTATTCCACCTGCTCCTCGT 30291 Query 452309 GGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGT 452368 || ||||| |||||| |||||| |||||||||||||||||||||| | ||||| | Sbjct 30292 GGTGTACCTCAGATTGAAGTTACCTTTGATGTTGATGCAAATGGTATTTTAAATGTTTCT 30351 Query 452369 GCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGT 452428 || |||| || | |||| ||||| | || || |||||||| || ||||| ||| Sbjct 30352 GCTCTTGACAAGACTACTGGTAAATCTAACAAGATCACAATTACCAACGATAAGGGTCGT 30411 Query 452429 TTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGAT 452488 | || || ||||| |||||| ||||| ||||||| || || | ||||| ||| ||| Sbjct 30412 CTTTCCAAGGAAGAAATTGAACGTATGGTTAATGAAGCTGAGAAGTACAAGGCTGAAGAT 30471 Query 452489 GAA 452491 ||| Sbjct 30472 GAA 30474 >seq230 Length=28575 Score = 172 bits (190), Expect = 2e-37 Identities = 459/691 (66%), Gaps = 14/691 (2%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| |||||| | || || || | ||| ||||| | ||| | | |||||| |||| Sbjct 6191 ATTGGTATTGATTTGGGTACAACTTATTCTTGTGTTGCCGTTCAAAAGAATGGACGTGTA 6250 Query 450977 GAAATTATAGCAAATGACCAAGGATCAC-GAACTACTCCTTCATGGGTAAGTTTTACGGA 451035 |||||||| ||||| || ||||| |||| | | |||||| || | || ||||| || Sbjct 6251 GAAATTATTGCAAACGATCAAGG-TCACCGTATTACTCCCTCCTATGTTGCCTTTACAGA 6309 Query 451036 TTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAAC 451093 ||| | | | || | || || || | |||| | | | || | || Sbjct 6310 CGATGAACGTTTGATTGGTGATGCCGCCAAGAACCAATACTC--TGCTAACCCTAAGCGT 6367 Query 451094 ACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAA 451153 || || | |||||| || ||| | ||||| ||| | |||||| | || ||| || Sbjct 6368 ACTGTCTTTGATGCCAAGCGTCTCATTGGTCGTCGTTTCGATGATAAGGAAGTTCAACAA 6427 Query 451154 GAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTA 451213 || | || ||| | | || || || || ||| || | |||| ||||| Sbjct 6428 GATATGAAGCACTTCCCCTTCGACGTTGTCAA-CAAGAATGGTGCCCCTCACATCAAGGT 6486 Query 451214 AATTATAAAGG-TGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTAC 451272 | | |||| |||| | || ||| |||||||||||||||| ||||||| | || Sbjct 6487 TGCTGTCAAGGGTGAAGACAGAATTTTCACTCCTGAAGAAATTTCTGGTATGGTTTTGAC 6546 Query 451273 TAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTAC 451332 || ||||| ||||| || ||| || | ||| || |||||| |||| || | || Sbjct 6547 AAAGATGAAGGAAACTGCTGAAGCTTACCTCGGTAAGCCTGTTACTCATGCTGTTGTCAC 6606 Query 451333 TGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGC 451392 ||||| || || ||||| || || ||||| ||||| || || ||||| || |||||| Sbjct 6607 CGTTCCTGCCTACTTCAACGACGCCCAACGTCAAGCCACCAAGGATGCCGGTACTATTGC 6666 Query 451393 TGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 |||||| || | ||||| ||| | ||||||||||| || |||||| | || || || | Sbjct 6667 TGGTTTGAAGATCCTTCGTATTGTCAATGAACCTACTGCCGCTGCTATTGCCTACGG-TT 6725 Query 451453 AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAAC 451512 ||| || || || | ||||| || | | || | ||| || ||||| || || Sbjct 6726 TGGATAA--GAATGA---CGGCGAAAAGAACGTCCTTGTTTATGACTTGGGTGGTGGTAC 6780 Query 451513 TCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGG 451572 | |||| ||| | | || ||||||||||| | |||||||| || || ||| Sbjct 6781 TTTTGATGTCTCTCTCTTGTCTATTGAAGATGGTATCTTTGAAGTCTTAGCTACTGCTGG 6840 Query 451573 TGATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||| ||||| | || ||||||||| | ||| Sbjct 6841 TGACACTCACTTGGGTGGTGAAGATTTCGAT 6871 Score = 150 bits (166), Expect = 7e-31 Identities = 417/639 (65%), Gaps = 14/639 (2%) Strand=Plus/Plus Query 451842 TGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAA 451901 ||||||| || || ||||| | | ||| || | || || ||| || ||||||| | Sbjct 7113 TGAAACCCGTCGAACAAGTCCTCAAGGATGCTGGTTTGAGCAAGGATCAAGTTGATGATA 7172 Query 451902 TTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTCTTCT 451957 |||| || ||||| |||||||| || ||||| || ||||| | | | | ||||| Sbjct 7173 TTGTCCTCGTAGGTGGTTCTACTCGTATTCCCAAGGTTCAAAAACTCCTTCAAGACTTCT 7232 Query 451958 TATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGT 452017 | | | | ||| | | | || | | || ||||||||||||||||| |||||| Sbjct 7233 TCAATGGTAAGAAGCCTTCCA----AGGGTATTAACCCTGATGAAGCTGTTGCCTATGGT 7288 Query 452018 GCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTG 452077 ||||| || |||| | |||||| | ||| || ||| | | | ||| | Sbjct 7289 GCTGCCGTCCAAGGCGGTATTCTCTCTGGT------GAAGAAGCCTCTGACAAGATTGTC 7342 Query 452078 TTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAAT 452137 || | ||||| | ||| | | || || ||||||| ||||||| | ||||| || Sbjct 7343 TTGTTGGATGTCAACCCTTTGACCCTCGGTATTGAAACCACTGGTGGTGTCATGACCAAG 7402 Query 452138 TTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGT 452197 || ||| || ||| ||||||| || ||| |||| || ||| || Sbjct 7403 TTGATTCCCCGTAACACTGTTATTCCTACCAAGAAGTCCCAAATCTTCTCTACTGCTGCC 7462 Query 452198 GATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGAT 452257 ||||||||||| ||| || ||||| |||||||| |||||||| |||| ||| Sbjct 7463 GATAACCAACCTACTGTCTTGATCCAAGTCTTTGAAGGTGAACGTGCCTTGACCAAGGAT 7522 Query 452258 AATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCT 452317 || || || || | || | || ||| | ||| || | || |||| Sbjct 7523 AACAACCTTCTCGGTAAGTTCGAGTTGTCTGGTATTGCCCCTGCCCCTCGTGGTGTTCCT 7582 Query 452318 CAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAA 452377 || |||||| | |||| || ||||||| || ||||| | || || || || | ||| Sbjct 7583 CAGATTGAAGTCACCTTCGAAATTGATGCCAACGGTATCTTGAAGGTCAGCGCTGCTGAT 7642 Query 452378 AAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAA 452437 || | ||||| ||||| ||| || || ||||| ||||| ||| ||| | ||| || Sbjct 7643 AAGGCTTCTGGTAAATCCGAATCTATCACCATTACCAATGACAAAGGTCGTCTCTCTCAA 7702 Query 452438 GAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTC 452476 ||||||||||| ||||| | ||||| ||| ||||| Sbjct 7703 GAAGATATTGATCGTATGGTCAAGGAAGCTGAAGAATTC 7741 >seq109 Length=78937 Score = 141 bits (156), Expect = 4e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 391046 TATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATC 391105 ||| ||| | || || || || ||||| ||||| || || |||||| | || || ||||| Sbjct 18524 TATCATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTCGAATC 18465 Query 391106 ATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGA 391165 ||||| | || || | | |||||||| |||||||| |||||||| ||||||||||| Sbjct 18464 TTCTGACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGA 18405 Query 391166 TCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTA 391225 |||||||||| | || || | || |||||||| |||||||| | || | || || Sbjct 18404 TCAACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTA 18345 Query 391226 TAATATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| ||| | ||||| | || |||||||| || Sbjct 18344 TAACATTCAAAAGGAATCTACTCTTCACTTGGT 18312 Score = 84.2 bits (92), Expect = 9e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 391104 TCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCT 391163 |||||||||| | |||| | | ||| ||||||||||| ||||||| ||||| || Sbjct 18238 TCATCTGATACCGTTGATATTGTGAAAAGCAAAATTCAAGAAAAGGAAGACATTCCGCCA 18179 Query 391164 GATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207 |||||||||||||||| || | || |||||||| ||| |||| Sbjct 18178 AATCAACAACGTTTAATCTTTGCTGGCAAACAACTCGAAAATGG 18135 >seq91 Length=92626 Score = 116 bits (128), Expect = 1e-20 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 ||||| | |||||| | | || ||||| || |||||||||||||| || ||||||||| Sbjct 70131 TCTGACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGAT 70072 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 ||||||||| | |||||| | || |||||||| ||||| || | || ||| ||||| Sbjct 70071 CAACAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTAC 70012 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGT 391258 || ||| | ||||| | || |||||||| || Sbjct 70011 AACATTCAAAAGGAATCTACCCTTCACTTGGT 69980 >seq11 Length=236632 Score = 107 bits (118), Expect = 8e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 391095 GATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGA 391154 || || || || ||||||| || ||| | | || ||||| || ||||| |||||||| Sbjct 1 GAAGTCGAGTCCTCTGATAGTATCGAAAATGTCAAGCAAAAGATCCAAGACAAGGAAGGT 60 Query 391155 ATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 || |||||||||||||||||| | |||||| | || || || || |||||||| | ||| Sbjct 61 ATCCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGTCGTACT 120 Query 391215 TTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| ||||| || || | || || | || |||||||| || Sbjct 121 TTGAGTGATTACAACATCCAAAAAGAATCTACTCTTCACTTGGT 164 >seq165 Length=49949 Score = 93.3 bits (102), Expect = 2e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 391128 AAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCA 391187 || ||||| |||||||| |||||||| ||||||||||| ||||||||| | || || | Sbjct 37976 AAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAACGTCTTATCTTTGCC 37917 Query 391188 GGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACA 391247 || |||||||| ||||| || | || ||| || || || || | ||||| | || Sbjct 37916 GGTAAACAACTCGAAGACGGTCGTACCTTGAGCGACTACAACATCCAAAAGGAATCTACT 37857 Query 391248 CTTCACTTAGT 391258 || |||||||| Sbjct 37856 CTCCACTTAGT 37846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975704224220480