Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq70 250 3e-61 seq106 158 2e-33 seq251 98.7 1e-15 >seq70 Length=105670 Score = 250 bits (276), Expect = 3e-61 Identities = 891/1377 (65%), Gaps = 22/1377 (2%) Strand=Plus/Minus Query 111622 TGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACAT 111681 || ||||||| || ||||||||||||||||| ||||||||| | | | | ||||||| Sbjct 4705 TGATCATGCGTGTTGCGATCGGTATCCATGGAACCGATATTGATGCAGCTATTGAGACAT 4646 Query 111682 ACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTA 111741 || || ||||||| | || | ||||| | || || || || || || || | Sbjct 4645 ACAACTTGATGTCCGAAAGATACTTTACACACGCTAGTCCTACTCTATTTAATGCAGGCA 4586 Query 111742 CACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATG 111801 |||| | ||||| ||||| ||| ||| | | | | || || ||||| ||| | | Sbjct 4585 CACCTCGTCCCCAGATGTCTTCTTGCTTCTTGCTCACCATGAAAGAAGATTCGATCGAAG 4526 Query 111802 GCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGA 111861 | || || | || |||| ||||| |||||||| ||| || || ||||| || Sbjct 4525 GTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAGACAGCAGGCGGTATTGGCT 4466 Query 111862 TGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAG 111921 | |||| || | | | || | || ||| || || || ||| | || Sbjct 4465 TAAACATTCACAACATTCGTGCTAGTGGATCATACATTGCCGGCACCAACGGTTACTCCA 4406 Query 111922 ATGGTATTATT-CCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCT 111980 | || ||| || || ||||| || || || ||| || || || ||||| | |||| | Sbjct 4405 ACGG-ATTGTTGCCCATGCTACGTGTTTTCAACAATACGGCTCGTTATGTCGATCAAGGT 4347 Query 111981 GG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATC 112034 || ||||| ||| | ||||| | || | || || ||||| || || || Sbjct 4346 GGTAATAAGCGTCC---GGGCGCATTCGCAATGTACTTGGAACCTTGGCATGCAGACATT 4290 Query 112035 ATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTC 112094 | || | || ||||| ||| || | || || || || ||||| Sbjct 4289 TTTACCTTTTTAGACTTGCGAAAAAACTTTGGCAAAGACGAAATCAGGGCTCGTGATCTG 4230 Query 112095 TTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGG 112154 |||| |||||||||||||| ||||| |||||| || | || || |||| ||||| Sbjct 4229 TTCTATGCTCTCTGGATTCCTGATCTTTTCATGCAGCGTGTCAGAGACGGTGGTGATTGG 4170 Query 112155 TCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAA 112214 ||||| |||||||| | |||| || || | || | |||||| ||||||| Sbjct 4169 TCTCTGTTTTGTCCCAATGAGGCTCCTGGATTACATGAAATCTGGGGTGACGAGTTTGTT 4110 Query 112215 GCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGAT 112274 || ||||| ||| ||||| ||| | | || | | ||| | ||| | Sbjct 4109 GCTCTCTATGAAAAATACGAACGTGAAGGAAGAGCTAGAGAAACGATCAAGGCTCAAAAG 4050 Query 112275 GTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAA 112334 ||||| | || ||| | | ||||||| ||||| || | |||| || || || || Sbjct 4049 CTGTGGTATGCCATTTTGGAAGCTCAAACGGAGACAGGCAATCCATTCATACTCTATAAG 3990 Query 112335 GACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTC 112394 || || |||||| |||||||||||| | || |||||| ||||||| | ||| || Sbjct 3989 GATGCTTGTAACAGAAAGAGTAATCAGCAAAACTTGGGTACGATCAAGTGCAGCAATCTG 3930 Query 112395 TGTACAGAAATCTTGGAAT-TTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATC 112453 ||||||||||| | |||| | || | ||||| ||||| |||||| | || || Sbjct 3929 TGTACAGAAATTGTTGAATACTCGAGTC-CTGATGAAGTCGCTGTCTGTAACTTGGCCTC 3871 Query 112454 AATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCA 112513 || ||||| || | ||||| |||| | ||| || | | ||||| ||||||| || Sbjct 3870 CATTGCTCTGCCTACCTATGT-GATCAATAGAGAA--AAGTATGATTTCCAAAAACTGCA 3814 Query 112514 CGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 112573 ||| ||||| || | |||| | |||| | |||| | || |||| |||| || || Sbjct 3813 CGATGTTACCAAGGTTATCACTAGAAACTTGAACAAGATCATCGATATCAATTACTATCC 3754 Query 112574 CGTTGAGACTGCTCGTAA-ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAG 112632 || || || || ||| || | ||||||| | || |||||| | ||||| |||| Sbjct 3753 TGTCATCGAAGC-CGAAAGATCCAACAAGAGACACAGACCGATTGGTTTAGGTGTTCAAG 3695 Query 112633 GTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 112692 | | || || ||||| | ||| | |||| ||||| ||||| ||| | Sbjct 3694 GCTTAGCCGACACTTTCATGGCTCTTCGTTATCCATTCGATTCACCTGAAGCCAAGCAGT 3635 Query 112693 TCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGG 112752 | || | || ||||| || || || || || || || || || | ||||||| Sbjct 3634 TGAACATTCAAATCTTTGAAACCATCTACCATGCTGCCCTGGAAGCCTCCTGCGAGTTGG 3575 Query 112753 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTT 112811 | || |||| || || ||||||| ||| || || | || |||||| | || Sbjct 3574 CTGAAAAGTATGGACCTTACGAAACCTATGAAGGCAGCCCTGTGTC-CAAGGGTATCCTG 3516 Query 112812 CAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACGCTCTCAAGGA 112870 |||| ||| |||| |||| || | ||| | | | || ||||||| ||| |||||||| Sbjct 3515 CAATATGACATGT-GGAATGTCACACCTACCAACCTCTGGGACTGGGCCGCACTCAAGGA 3457 Query 112871 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTC 112930 | || || | ||| | || ||| ||| || | || || ||||| || ||||| Sbjct 3456 AAAGATTGCTAAGCATGGTGTCCGCAACTCTCTGCTGGTTGCTCCTATGCCTACTGCCTC 3397 Query 112931 CACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 ||| | ||||| | ||| |||||||| |||||||| ||||| | ||| |||| Sbjct 3396 CACTTCTCAAATGCTCGGTTTCAATGAATGTTTTGAACCTTACACATCCAACTTCTA 3340 >seq106 Length=79482 Score = 158 bits (174), Expect = 2e-33 Identities = 296/422 (70%), Gaps = 11/422 (3%) Strand=Plus/Minus Query 101902 TCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTTG 101961 || |||| ||||||||||| || ||||| |||||| ||| || | | | |||||| Sbjct 37821 TCTTGGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTTTT 37762 Query 101962 CTGATGAGGTGCA-ATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAAT-GA 102019 |||||| || | || | ||||||| | || |||||||| | |||| |||| || || Sbjct 37761 GTGATGAAGTCAAGATTC-CTGAAGCTAAATGTTTCTATGGCTTTCAAA-TCATGATTGA 37704 Query 102020 AATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGA 102079 || | || | || || |||||| | || |||| ||||| || ||| || Sbjct 37703 AAACATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAAGA 37644 Query 102080 GAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAG-CGGATT 102138 ||| | ||||||| || || | || | || ||||| ||| |||||| | |||| Sbjct 37643 GAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTAT-CAAGAGAAAGGCTGATT 37585 Query 102139 GGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTG 102198 |||| | |||||| || |||| || |||||||||||||||| || | || |||| Sbjct 37584 GGGCCTTCAAGTGGATTTCCTCAAA--CG-GTTCCTTTGCTGAGCGCCTTGTTGCCTTTG 37528 Query 102199 CGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAG 102257 | ||| || ||||||||||||||||||||||| ||| | || | |||||||||||| Sbjct 37527 CTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTT-TGCTTCCATCTTTTGGCTCAAGAAA 37469 Query 102258 CGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTC 102317 || ||| | ||||| ||| | ||| ||| || | |||| |||||| || || || Sbjct 37468 CGTGGTTTGATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTT 37409 Query 102318 CA 102319 || Sbjct 37408 CA 37407 >seq251 Length=24034 Score = 98.7 bits (108), Expect = 1e-15 Identities = 202/295 (68%), Gaps = 4/295 (1%) Strand=Plus/Minus Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782 |||| || |||||||| ||||| |||||||| | ||| ||| ||||||||||| | | Sbjct 13490 TTGATGATCAGACCCTTAATGTGTGAACCGTCATGATCTTGATCTGTCATGATCATCAAA 13431 Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842 || ||||| || | ||| |||| || ||| | ||||| || ||||| || | || Sbjct 13430 CGGCCATATCGCAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGGCCAAGAATA 13371 Query 176843 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACA 176902 ||||| | |||| |||| ||| |||| | | ||| | |||||||| Sbjct 13370 GCCTTGATGTTTTTGATTTCTTCATTTTTCATGAGTTCAGCATTAGAAACGTCACGAACG 13311 Query 176903 TTCTTACA-CTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGA- 176960 ||| ||| || ||||| | ||||| ||||| |||| || ||||| || || || | Sbjct 13310 TTC-AACAGTTTGCCACGGATGGGGAATACACCATAGTAGTCACGACCCACTACTGACAT 13252 Query 176961 GACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACA 177015 | | | ||| | |||| || || |||||||| ||||| | ||| || || || Sbjct 13251 GCCACTCAA-AACAAGCGACTTAGCTGAATCACCTTCTGTGATGATCAGAGTGCA 13198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738054803200