Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq70 161 1e-34 seq106 109 6e-19 seq107 86.0 7e-12 >seq70 Length=105670 Score = 161 bits (178), Expect = 1e-34 Identities = 1075/1714 (63%), Gaps = 50/1714 (3%) Strand=Plus/Plus Query 109530 ACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTA 109589 |||||||||||| |||||||| |||||| ||| |||||||||||||||||||| Sbjct 3117 ACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACAGTCTTGTA 3176 Query 109590 CAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACC---AGCCTT 109646 | || || | | | || ||| | ||| |||||||| || || |||| | Sbjct 3177 GAGATCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGACCCTCCGTCAGCCAT 3236 Query 109647 CACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATC-----GTCA 109701 | |||| | ||||| || | ||||||||| | | ||||| || | Sbjct 3237 GATCATG---TTCTTCACATCATCGTTCCAGAGACCCATATCGACCAGATCACGGAGTAA 3293 Query 109702 ACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTA 109761 |||| |||||||| ||||||| | || || ||| ||||| ||| Sbjct 3294 CCAAGG-----GTTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGTTG 3348 Query 109762 GTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGC 109821 | ||||| ||||| ||||| |||||| || || ||||| | |||||| || || ||| Sbjct 3349 GATGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGC 3408 Query 109822 ATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCG 109881 || ||||| | || ||| ||| |||| ||| | | | | | || | |||| Sbjct 3409 ATAGGAGCAACCAGCAGAGAGTTGCGGACACCATGCTTAGCAATCTTTTCCTTGAGTGCG 3468 Query 109882 TCCCAATCATAACGACCACTAAATT--TAG-TCTCACCATCCCACATATCTGGTTGAAGT 109938 |||| || ||| | || ||| | | || || |||||| || ||| || Sbjct 3469 GCCCAGTC-------CCAG-AGGTTGGTAGGTGTGAC-ATTCCACATGTCATATTGCAGG 3519 Query 109939 ACACCCTCAGCAGCAGGAGAACCCTTGAAAC-TCTCGTACGACCCCTCAACCTCGGCCAA 109997 | ||||| | |||| | |||| | | | ||||| | || | || ||||| Sbjct 3520 ATACCCTTGGACACAGG-GCTGCCTTCATAGGTTTCGTAAGGTCCATACTTTTCAGCCAA 3578 Query 109998 CTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAG 110057 |||| | || || || || || ||||| || || || ||||| || ||| |||| | Sbjct 3579 CTCGCAGGAGGCTTCCAGGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTG 3638 Query 110058 GCGAGACTCTTCAC---AGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACC 110114 | ||||| | ||||| ||| || | | || || || |||| || Sbjct 3639 CTTGG---CTTCAGGTGAATCGAATGGATAACGAAGAGCCATGAAAGTGTCGGCTAAGCC 3695 Query 110115 CTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACG-- 110172 |||||||| | |||||| || | || || |||| || | | || ||| | | Sbjct 3696 TTGAACACCTAAACCAATCGGTCTGTGTCTCTTGTTGGATCTTTCGGC---TTCGATGAC 3752 Query 110173 -GGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTC 110231 || || | ||| ||||||| | || | || | || | | ||| || | || Sbjct 3753 AGGATAGTAATTGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATC 3812 Query 110232 ATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAAT 110291 || ||||| | | |||| || ||||| ||| | || ||||| | || |||||||| Sbjct 3813 GTGCAGTTTTTGGAAATCATAC-TTTTC-TCTATTGATC-ACATAGGTAGGCAGAGCAAT 3869 Query 110292 AGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACA 110351 || || | || || |||| || || | |||||| | |||||| ||||| Sbjct 3870 GGAGGCCAAGTTACAGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTACA 3929 Query 110352 CAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATC 110411 || ||| | ||| || ||||||||| | |||||| || ||| || ||||| Sbjct 3930 CAGATTGCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATC 3989 Query 110412 CTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATAC 110471 ||||||||| ||| |||| | || || ||||| || | | | |||||| | ||| | Sbjct 3990 CTTATAGAGTATGAATGGATTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACAG 4049 Query 110472 ATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTC 110531 | || || ||| | |||| ||||| ||||| || || | | Sbjct 4050 CTTTTGAGCCTTGATCGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGC 4109 Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591 |||| || | || | | ||| | || |||| | |||||| || || || Sbjct 4110 AACAAACTCGTCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGA 4169 Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651 ||||| ||||| || || | || |||||| || ||||||||||| | || |||| Sbjct 4170 CCAATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGAA 4229 Query 110652 AAGGTCACG-GCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCA 110710 || ||||| || || || || | || ||| || | || |||||| | Sbjct 4230 CAGATCACGAGCCCTGATT-TCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGTAA 4288 Query 110711 TGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---ACGACCCG 110767 || || | ||||| ||||| | || | |||| | ||| ||| | ||| Sbjct 4289 AAATGTCTGCATGCCAAGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCAC 4348 Query 110768 CCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGG 110827 | || | ||||| || || || ||||| || | ||||| || | | ||| | || Sbjct 4349 CTTGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAATCCGTTGG 4408 Query 110828 ATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATAC 110887 | | ||| || || || ||| || | | |||||||||| ||| || | | | Sbjct 4409 AGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAAGC 4468 Query 110888 CAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCAT 110947 ||||||| || || ||| ||||| ||||| | |||| || |||| ||||| | Sbjct 4469 CAATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTT 4528 Query 110948 CAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTC 111007 | ||||||||| | || ||| | | ||||||||||||||||| |||||||| || | Sbjct 4529 CGATCGAATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGC 4588 Query 111008 CCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATG 111067 | ||||| || || ||||| | || || | || | || ||||||| |||||||| Sbjct 4589 CTGCATTAAATAGAGTAGGACTAGCGTGTGTAAAGTATCTTTCGGACATCAAGTTGTATG 4648 Query 111068 TGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATAT 111127 | || | || | | ||| | || || ||||| || ||||| ||||||| || || Sbjct 4649 TCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAAT 4708 Query 111128 ATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCT 111187 ||||| |||| | ||| || |||| |||||||| ||| || || | Sbjct 4709 GCTGAGGACGTTCGGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGAGTTT 4768 Query 111188 TGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||| ||||||| | | | ||||||||| || Sbjct 4769 TGAAACCAAAGAAGTTGTACTTGAAATCACGGTC 4802 >seq106 Length=79482 Score = 109 bits (120), Expect = 6e-19 Identities = 294/436 (67%), Gaps = 18/436 (4%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTC 119553 ||||| || |||||| |||||||| ||| |||| | ||||| ||||| |||| | Sbjct 37395 GCAAAGTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAA--C 37452 Query 119554 CAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGA 119613 | ||||| | || | |||||| ||||||||||||| | ||| ||||| ||||||| Sbjct 37453 CGGGCATCAAACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGA 37512 Query 119614 TGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAA-- 119671 | || || ||| || || || | || ||||||||||| | | ||| ||| Sbjct 37513 TACCTTCGACAGCAGCAAAGGCAACAAGGCGCTCAGCAAAGGAAC--CGTTTGAGGAAAT 37570 Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA 119731 |||||||| ||||| | ||||| | || || || |||| ||| | || || ||| Sbjct 37571 CCACTTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGC--AGAA 37628 Query 119732 AAGTTGC--TTCTTT-TCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788 ||| || |||||| || ||| || ||||| | ||||| | | ||| || Sbjct 37629 AAG-AGCATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGT 37687 Query 119789 CTCACCATGAACCATTTCATTGTGTGA-CTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847 || | |||| ||||| | ||| ||| || |||| || | |||||| | || Sbjct 37688 TTCTGCGTGAATGTTTTCAAT-CATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAA 37746 Query 119848 TTTGCACTTCGTCAGCAAAATTGTTG-TTGATATTTTCAAAAACAATTCCATCGGATCCA 119906 | | ||||| ||| ||||| | ||| | |||||| |||||| ||||| || ||| Sbjct 37747 TCTTGACTTCATCA-CAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCA 37805 Query 119907 GCGAAGAATGCTAAGA 119922 || ||||| || |||| Sbjct 37806 GCAAAGAAGGCCAAGA 37821 >seq107 Length=79357 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 21102 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 21161 Query 136777 GGGAACA 136783 | || || Sbjct 21162 GTGACCA 21168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971877168000