Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq70 282 5e-71 seq251 95.1 1e-14 >seq70 Length=105670 Score = 282 bits (312), Expect = 5e-71 Identities = 1111/1726 (64%), Gaps = 40/1726 (2%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 || || || ||||| || ||||| | ||| | || ||| | || | |||||| | | Sbjct 2995 CGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAGCCATAAAAGTGCATACTGGTG 3054 Query 105650 AGCTTGGACATCGTTGGACTTT-CCATGAAAAGATTCATACTTTGACTCTGGTCAATGAA 105708 ||||| || ||||| | |||| || | |||| ||||||||| |||||||| | Sbjct 3055 AGCTTAC-CAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATATA 3113 Query 105709 GCGACCACGTTGTGCCGCCATATCAATGACAT--CCTTCATCTTGATTTCCCACACTGTG 105766 |||||| | || ||||| ||||||| | | || | ||||||||| || || Sbjct 3114 CGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGA--GATTTCCCAGACAGTC 3171 Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAG-ATATTTTGAATTGAACCCCCC-- 105823 |||||||| || | | | ||||| ||| | | || ||||| || || || Sbjct 3172 TTGTAGAGATCTTTCAAGTTTTGAGGGATG-CTGGGCACGTTCTGAATAGACCCTCCGTC 3230 Query 105824 -GCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATT 105882 ||| ||| |||| | ||||| ||| | | ||| ||||| || | |||||| Sbjct 3231 AGCCATGATCATG---TTCTTCACATCATCGTTCCAGAGACCCATATCGACCAGATCACG 3287 Query 105883 GACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTT 105942 || | |||||| || | || || | ||| | | |||| ||| Sbjct 3288 GAGTAACCAAGGGTTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGTT 3347 Query 105943 CGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGG 106002 | ||||| |||||||| |||||||| ||| | ||||| | |||||||| || || Sbjct 3348 GGATGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGG 3407 Query 106003 CATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAAC 106062 ||| || || | || ||| ||| || | ||| | | || ||||||||| | Sbjct 3408 CATAGGAGCAACCAGCAGAGAGTTGCGGACACCATGCTTAGCAATCTTTTCCTTGAGTGC 3467 Query 106063 ATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121 ||||||| || | | | ||| | || |||| |||| ||| |||| || | || | Sbjct 3468 GGCCCAGTCCCAGAGGTTGGTAGGTGTGACATTCC-ACATGTCATATTGCAGGATACCCT 3526 Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 106181 |||| || || ||| | || || || | || | ||||||||| || ||| Sbjct 3527 TGGACACAGGGCTGCCTTCATAGGTTTCGTAAGGTCCATACTTTTCAGCCAACTCGCAGG 3586 Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 106241 || ||||||| || || || |||||||||||||| || |||| || |||||||| Sbjct 3587 AGGCTTCCAGGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCTT 3646 Query 106242 CATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCA 106301 || |||||| |||| || || || || || || | ||||||||||| | Sbjct 3647 CAGGTGAATCGAATGGATAACGAAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACACCTA 3706 Query 106302 AACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAATTT 106360 ||||||| |||||||||| | | || || |||||| || || ||||| |||| Sbjct 3707 AACCAATCGGTCTGTGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAGGATAGTAATTG 3765 Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420 | || |||| ||| | ||| | || | || ||| || | || || ||||||| Sbjct 3766 ATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGG 3825 Query 106421 TAATCAAAAGTGCGAGTCTCTTCATTGA---CATACTTTGGAAGGGCGATTGATGCCAAA 106477 ||||| | | ||||| ||||| |||| | || || || || || ||||| Sbjct 3826 AAATCATACTTT----TCTCT--ATTGATCACATAGGTAGGCAGAGCAATGGAGGCCAAG 3879 Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 || || ||||| ||||| | | ||| || | |||||||||||||| ||| Sbjct 3880 TTACAGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTACACAGATTGCTG 3939 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 | ||| ||||| ||||| || | || ||||||||| |||| || |||||||| ||||| Sbjct 3940 CACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGT 3999 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC 106656 ||| | || | || |||||||| || | | | ||| || | ||||| | | | | | Sbjct 4000 ATGAATGGATTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGCC 4059 Query 106657 TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 106716 | | | | | | || | ||| || ||||| ||| ||||| || ||||||| Sbjct 4060 TTG-ATCGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACTC 4118 Query 106717 CTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 106776 |||||| || | || || |||| | ||||| || |||||||| | ||| Sbjct 4119 GTCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGACCAATCACC 4178 Query 106777 ACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT 106836 ||| || || |||| ||||||||| || |||||||| || | | || ||||| | Sbjct 4179 ACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGAACAGATCACG 4238 Query 106837 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 106896 | || || || | || ||| ||| || || | || | || || || Sbjct 4239 AGCCCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGTAAAAATGTCTGC 4298 Query 106897 GTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATT 106950 ||||| || || | || | ||||| | ||| ||||| ||| |||||| Sbjct 4299 ATGCCAAGGTTCCAAGTACATTGCGAATGCGCCC---GGACGCTTATTACCACCTTGATC 4355 Query 106951 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG-AATAATACCATCTGATTGAC 107009 ||||| || || || ||| || || || ||||| || || ||| || | || | || Sbjct 4356 GACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAAT-CCGTTGGAGTAAC 4414 Query 107010 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 107069 | || || || ||| ||| | | || | | | || |||| | ||||||| Sbjct 4415 CGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAAGCCAATAC 4474 Query 107070 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 107129 | || || ||| |||||||| ||||| | || || |||||||||| | ||| | Sbjct 4475 CGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCG 4534 Query 107130 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 107189 | || || || ||| || | ||||||| |||||||| || | ||||| || |||| Sbjct 4535 AATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTGCAT 4594 Query 107190 TGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCA 107249 | || || || || | ||||| | || | || ||||||| || ||||||||| | Sbjct 4595 TAAATAGAGTAGGACTAGCGTGTGTAAAGTATCTTTCGGACATCAAGTTGTATGTCTCAA 4654 Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 | | |||||| || || ||||| ||||| || |||||||| Sbjct 4655 TAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCAT 4700 >seq251 Length=24034 Score = 95.1 bits (104), Expect = 1e-14 Identities = 232/349 (66%), Gaps = 17/349 (5%) Strand=Plus/Minus Query 169178 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 169237 ||| |||||||| ||||| ||||| |||| ||| ||||||||| ||||| | ||| || Sbjct 13485 GATCAGACCCTTAATGTGTGAACCGTCATGATCTTGATCTGTCATGATCATCAAACGGCC 13426 Query 169238 ATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCCAAGATCTTCTT 169297 ||| || | ||| |||| || || | ||| || || ||||| || | || ||| Sbjct 13425 ATATCGCAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGGCCAAGAATAGCCTT 13366 Query 169298 GAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACATTCTT 169357 || | |||| |||| ||| |||| | || ||| |||| || || ||| Sbjct 13365 GATGTTTTTGATTTCTTCATTTTTCATGAGTTCAGCATTAGAAACGTCACGAACGTTCA- 13307 Query 169358 ACACTTC-CCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCG 169416 ||| || ||||||| || || || ||||||| ||||| || || || || | || Sbjct 13306 ACAGTTTGCCACGGATGGGGAATACACCATAGTAGTCACGACCCACTACTGACATGCCAC 13247 Query 169417 CGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACA---------CT 169467 | |||| | || ||||||||||| || |||| || || || || || Sbjct 13246 TCAAAACAAGCGACTTAGCTGAATCACCTTCTGTGATGATCAGAGTGCAGCGCTTGTTCT 13187 Query 169468 TTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAAT 169516 |||||| | | ||| || |||||| || |||||||||||||| Sbjct 13186 TTCCAG---GAAC---ACCGGCAAAGTTTGCATCTTCCAACTTGGGAAT 13144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976670134400