Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq11 116 4e-21 >seq11 Length=236632 Score = 116 bits (128), Expect = 4e-21 Identities = 485/750 (65%), Gaps = 19/750 (3%) Strand=Plus/Minus Query 159046 TATCATAGTGAGACTGACATGATGAGATATATCTATGAGTTAGCATCAAAAGATTTCTCA 159105 ||||| |||||| || ||| | |||| ||| || | | | | || ||| |||| Sbjct 182175 TATCACTCTGAGACCGAGATGCTTCGATACATCCATCATCTCGAAAGCAAGGATCTCTCC 182116 Query 159106 TTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACGCAGCATCAGAA 159165 || || || ||| |||| ||||| || ||||| ||||| | ||||| || | ||| Sbjct 182115 TTGGTCCATTCCATGATTCCTCTTGGCAGCTGTACCATGAAGTTGAACGCCACAACCGAA 182056 Query 159166 CTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTAT-GATACA 159224 |||| ||||| | ||| || ||| | || | || ||| ||||| | ||| || Sbjct 182055 ATGATTCCTGTTACCTGGCCCGAATTTTCCAATATTCACCCATTCGCACCTGTTGAT-CA 181997 Query 159225 GACCATGGGTTATCAAAAAATTATAGATGA-CTTACAGAAATGGTTATGTGATATCACAG 159283 ||| || |||| || | ||||| ||| |||| | | | || ||||| | Sbjct 181996 GACACGTGGCTATCTCGCGATGTTGGATGAGCTTGCAGATGACTTGAAG-GAAATCACTG 181938 Query 159284 GGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGT 159343 | |||||| | | || | ||||||||| |||| | || ||||| || || || || Sbjct 181937 GCTTTGATGGTGTCTCCCTTCAACCTAACTCAGGCGCTCAAGGTGAATACGCTGGTCTTC 181878 Query 159344 TAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATA---AAAGAAATGTATGTTTGA 159400 | |||| || ||||| |||| || | | ||| | | | ||||| ||||||| Sbjct 181877 GTGTCATCCGTGCCTACCACCAAGC-TC--GTGGTGAAAGCCACCGTAATGTGTGTTTGA 181821 Query 159401 TACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTG 159460 | || ||||| || || || || |||||||| |||| ||| || ||| | ||| Sbjct 181820 TCCCTATCTCAGCTCACGGCACCAACCCTGCATCTGCAGCCATGTGTGGTATGGACATTG 181761 Query 159461 TAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCT-AGAGAAGAAAGCA 159519 | | | ||||||| | || ||| | ||||| || ||| | | || | |||||| Sbjct 181760 TGATTATTCAGTGTGACAGCAAGGGTAACTTGGACATGAAGGATTTGAAAGCA-AAAGCA 181702 Query 159520 ATCATGAATACATTTGAACTGTCATGT---ATTATGATTACATATCCATCTACACATGGT 159576 | | |||| || | | || || ||||| || || || |||| |||| Sbjct 181701 GAAAAG--TACAAG-GACCGATTGGGTGCTATCATGATCACGTACCCTAGTACATTTGGT 181645 Query 159577 GTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTA 159636 | |||||| || || | ||| || | || || | | || |||| || Sbjct 181644 ATGTTTGAAGCAGGTGTCGCTGACGCATGCAAAGTCGTACACCAACACGGCGGTCTCGTT 181585 Query 159637 TATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGT 159696 || ||||| ||||| || | ||||| ||| ||||| || | || || || |||| Sbjct 181584 TACCTTGACGGTGCCAACTTGAATGCCCAGATAGGTTTAACCAAGCCTGCAGAGATTGGT 181525 Query 159697 GCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGT 159756 || || || ||||| | ||||| || ||||| ||||||||||| ||||| ||||| || Sbjct 181524 GCTGACGTCTGTCACATGAACTTGCACAAGACCTTCTGTATTCCTCATGGTGGTGGTGGA 181465 Query 159757 CCTGGCGTAGGTCCTATTG-GTGTAGCAAA 159785 || || | || ||||| | |||| |||| Sbjct 181464 CCAGGTATGGGCCCTATCGCATGTACCAAA 181435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588047083641600