Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq106 199 5e-46 >seq106 Length=79482 Score = 199 bits (220), Expect = 5e-46 Identities = 368/536 (69%), Gaps = 8/536 (1%) Strand=Plus/Plus Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224 |||| || | ||| ||||| ||| ||| | ||||||||| | || ||||||||||| Sbjct 37381 TAAATAAAAGACAAGCAAAGTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGC 37440 Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284 || || || || ||||| ||||| | ||| || | |||||| || | ||||| || | Sbjct 37441 TGAATGTCAAACCGGGCATCAAACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAGGAAC 37500 Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344 |||| ||||| |||||||| || || ||||| || ||||| || | | |||| |||| Sbjct 37501 CAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACAAGGCGCTCAGC-AAAG--GAAC 37557 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | |||||||| || | |||||| |||||| || | ||| || || | Sbjct 37558 CGTTTGAGGAAATCCACTTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGT 37617 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || ||||| | | ||| |||| ||||| | |||||||| ||||| | | Sbjct 37618 CAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAA 37677 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| || |||| | |||||| |||||||| || ||||| ||||| ||||| ||| Sbjct 37678 GACTGTAAGTTTCTGCGTGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAG 37737 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||||| | | || || | | |||| | | | | |||||||||||||| || |||| Sbjct 37738 CTTCAGGAATCTTGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCAT 37797 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAAT- 37643 | | | |||||||| || | ||| ||||| | ||||| || | | || Sbjct 37798 CTGAACCAGCAAAGAAGGCCAAGACACGAGAGATAAAGAAACGTTCAT-TTTCGGTCATT 37856 Query 37644 ---TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 |||| |||||||| || ||| || ||||| | ||| ||| | |||||||| Sbjct 37857 TTGTTTTCCCAATCATGAAGATCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAA 37912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592312653782400