Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq109 136 3e-27 seq91 98.7 8e-16 seq11 98.7 8e-16 >seq109 Length=78937 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| |||||||| ||||| || || || ||| | || | |||| || Sbjct 18312 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCTTCG 18371 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| ||||| ||||| || | ||| |||||||| || ||||| ||||| || |||||| Sbjct 18372 AGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 18431 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || |||||||||||| | || | ||||||||| | ||| ||||| | ||| | || || Sbjct 18432 ATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCGACTTCTAAAGTAATTGTCTTT 18491 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | || || ||||| || |||||| Sbjct 18492 CCAGTAAGTGTCTTGACAAAGATTTGCATG 18521 >seq91 Length=92626 Score = 98.7 bits (108), Expect = 8e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || |||||||||||||| ||||| || |||||||| | || | | Sbjct 69973 ACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACC 70032 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || || | ||| ||||| || || || | ||| |||||||| || || || ||||| || Sbjct 70033 GTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTT 70092 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 |||||| || ||||| || ||| | || | |||||||| Sbjct 70093 ATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAGA 70131 >seq11 Length=236632 Score = 98.7 bits (108), Expect = 8e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| |||||||||||||| || |||||||| | ||| | |||| || Sbjct 164 ACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCACTCAAAGTACGACCATCTTCG 105 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || || | ||| |||||||| || || || ||||| || ||||| Sbjct 104 AGCTGCTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTGTCTTGG 45 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTC 101424 || ||||| || ||| |||| | | | ||||| | || ||||| Sbjct 44 ATCTTTTGCTTGACATTTTCGATACTATCAGAGGACTCGACTTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396275695399920