Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq70 194 3e-44 >seq70 Length=105670 Score = 194 bits (214), Expect = 3e-44 Identities = 864/1346 (64%), Gaps = 48/1346 (4%) Strand=Plus/Plus Query 212733 TCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCT 212792 ||||| |||||||| |||||| | || |||| ||||| || |||||| ||| ||| Sbjct 3124 TCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACAGTCTTGTAGAGATCT 3183 Query 212793 TTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGC 212849 || | || | |||| || ||| | |||||| | |||||| | || ||| ||| Sbjct 3184 TTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGACCCTCCGTCAGCCATGATCATG 3243 Query 212850 TGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGG-CACT---TGACCAGGTG 212905 | | || || ||||||||||| ||| | |||| ||| | |||| Sbjct 3244 TTCTT---CACATCATCGTTCCAGAGACCCATATCGACCAGATCACGGAGTAACCA---- 3296 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 ||||||||| || ||| | |||||||||||||| | | ||| ||||| || ||||| Sbjct 3297 AGGGTTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGTTGGATGTGTA 3356 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 || || | | || ||| || || || || | |||| ||| || ||||| ||||| Sbjct 3357 AGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATAGGAGC 3416 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 ||||| ||| ||| | || || |||| | || | || | |||||||| Sbjct 3417 AACCAGCAGAGAGTTGCGGACACCATGCTTAGCAATCTTTTCCTTGAGTGCGGCCCAGTC 3476 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| | | |||| | || |||||||||||| | |||| ||| || || Sbjct 3477 CCAGAGGTTGGT-AGGTG--------TGACATTCCACATGTCATATTGCAGGATACCCTT 3527 Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205 | ||| |||||||| | || | ||| || |||| || | |||| ||||||||| Sbjct 3528 GGACACAGGGCTGCCTTCATAGGTTTCGTAAGGTCCATACTTTTCAGCCAACTCGCAGGA 3587 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 || | ||||||||| | ||||||||||||||| || | |||| | || |||||| || Sbjct 3588 GGCTTCCAGGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCTTC 3647 Query 213266 TGGGGACGTGAAGGGCATCATCATGCG-TTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 || || ||| || || | | | | ||| || || | || || || || | Sbjct 3648 AGGTGAATCGAATGG-ATAACGAAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACACCTA 3706 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || || |||||||||||| ||| || ||| || || | || || | ||| Sbjct 3707 AACCAATCGGTCTGTGTCTCTTGTTGGATCTTTCGGC-TTCGATGACAGGATAGTAATTG 3765 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 |||||||||||||| | ||| | ||| || ||||| |||| | ||| | | | Sbjct 3766 ATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGG 3825 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 || | || | | | | | |||| | |||||| || ||| ||||| ||| Sbjct 3826 AAAT--CATACTTTTCTCTATTGAT-CACATAGGTAGGCAGAGCAATGGAGGCCAAGTTA 3882 Query 213504 CAAACGGCCACCTCCTGA-GAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562 || || || || || | | || || | ||| || | || || || ||||| |||||||| Sbjct 3883 CAGACAGCGACTTCATCAGGACTC-GAGTATTCAACAATTTCTGTACACAGATTGCTGCA 3941 Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCAT 213622 ||| || |||| ||| || || || |||| ||| || |||||| ||||| || Sbjct 3942 CTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTAT 4001 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCC 213680 | | || || ||||| || | ||| | |||| ||| || | ||| Sbjct 4002 GAATGGATTGCCTGTCTCCGTTTGAGCTTCCA--AAATGGCATACCACAGCTTTTGAGCC 4059 Query 213681 TTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAAT 213740 |||| | || ||||| | ||||| | ||| ||||| | || Sbjct 4060 TTGATCGTTTCTCT---AGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAAC 4116 Query 213741 TCGTGGCCCCAGA--CCCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAG 213797 |||| ||||||| | ||| | ||| ||| | || |||||| | || ||| Sbjct 4117 TCGTCACCCCAGATTTCATGT--AATCCAGGAGCCTCAT-TGGGACAAAACAGAGACCAA 4173 Query 213798 TCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGG 213857 || || | |||||||| | ||||||||| || || || | ||| || || |||||| Sbjct 4174 TCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGAACAGA 4233 Query 213858 TCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATG 213917 || | | ||| | ||||| ||| ||||||| |||| |||| |||| ||| ||| Sbjct 4234 TCACGAGCCCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGTAAAAATG 4293 Query 213918 TCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGG 213974 || || ||||| || |||| ||| || || || ||||||| || | || || || || Sbjct 4294 TCTGCATGCCAAGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCACCTTGA 4353 Query 213975 TCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT 214034 || || | ||| ||||||| | || || | ||| | || |||||||| | Sbjct 4354 TCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAATCCGTTGGAGTAA 4413 Query 214035 CCGTTGGTTCCCGCTATATACGAGCC 214060 |||||||| || || || || || || Sbjct 4414 CCGTTGGTGCCGGCAATGTATGATCC 4439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526279270400