Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq53 82.4 4e-11 >seq53 Length=125223 Score = 82.4 bits (90), Expect = 4e-11 Identities = 278/433 (64%), Gaps = 0/433 (0%) Strand=Plus/Minus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 |||||| || | ||| || | ||| | | | | || || || | ||| | |||||| || Sbjct 91703 CTCCATGAAAAGATCAGGCACCCATAATCCCAAGAACAAGTCGCGCGCGCGCATTTCCTC 91644 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 || | |||||| | || ||||| || || | ||| ||||| ||||||| Sbjct 91643 AGCACCATTGTTCTTTCGCAAGTCCAAGAATTCGAATACATCGACATGCCAAGGTTCTAT 91584 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 ||||| |||||| |||| || | ||| || || ||||| || | | || || || Sbjct 91583 ATAGACAGCAAAGTTACCGTTGCGTTTACCACCTCCTTGTGTCACAAAGCGAGCGGTGTC 91524 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169 ||| || ||| | |||||||| | ||| | || |||||||| | || | Sbjct 91523 ATTAAAGACTCGGAGCATTGGAATGATGCCATTGGAGGTACCGTTTGTTCCTGCGATATA 91464 Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229 || || | | ||| | |||||| || || | || ||||| | || || || Sbjct 91463 AGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAGCAGACTTGGAGAT 91404 Query 26230 AGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAA 26289 | |||||| | | ||||| | || |||| || || || |||||||| | Sbjct 91403 ACGAGCACAAGTGGTGATAGTATCATAGATGCCTTCGATACTGTCCTCTTTCATTTGAAC 91344 Query 26290 TAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGC 26349 | || ||| ||||||||| | | || ||| || | || || ||||| |||||||| Sbjct 91343 AAGGAAGCAACTAGATAATTGAGGTTTAGGTGTACCAGCGTTGAACAATGTAGGTGTAGC 91284 Query 26350 ATGAGTATAATAT 26362 ||||||| | ||| Sbjct 91283 ATGAGTAAAGTAT 91271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038273002000