Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq60 260 2e-64 >seq60 Length=120286 Score = 260 bits (288), Expect = 2e-64 Identities = 521/761 (68%), Gaps = 21/761 (3%) Strand=Plus/Plus Query 47553 AACCAATTGTTTAAAAGAAGTTTTAGGTTCCCAACCCAATTTTTTCTTTGCCTTAGAGGC 47612 |||||||| | ||||| | || | | ||| |||| || | | |||||||| | | Sbjct 115927 AACCAATTCGTCAAAAGTAACCTTGCGCTTCCAGCCCAGTTCTGTGTTTGCCTTTGTAGG 115986 Query 47613 ATCACCTAATAAGGTCTCTACTTCAGCAGGACGGAAATATTTAGAGTCAATTCTGATA-- 47670 |||||| |||||| || ||||||||||||||||| || || | |||||| | | | Sbjct 115987 ATCACCCAATAAGAGATCAACTTCAGCAGGACGGAAGTACTTGGGGTCAATGCGCACACG 116046 Query 47671 -ACCGTTTTACCA---TCAGAATCAATACCAACTTCATCAAGACCAGAACCTTCCCATCT 47726 ||| || || |||| ||| |||||||||| | | ||| ||||||||| Sbjct 116047 GACC---TTGCCTGTTTCAGCATCTTTACCAACTTCGTTCACACCTTCACCTTCCCAAAC 116103 Query 47727 AATATTCATATCAAAATAAGGTGCA-GATTCCTCAACAAACTGACGGACAGAATATTGAT 47785 |||| | | || | | || | | | || ||||| | ||| | | | | Sbjct 116104 AATAGT-ACGTCCAGTCACCTTGAAAGCCTTTTCGACAAAGCTTCTGACTGTGTGTGTTT 116162 Query 47786 TTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCT 47845 || || || | || ||||| | ||| | ||||| || ||||| | ||||||| | | Sbjct 116163 CACCAGTAGCCAAGACGAAATCTTGAGGCTGATCTTGCTGCAGCATGAGCCACATACCTT 116222 Query 47846 CGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAAC 47905 |||||||||| | ||||||||||| ||||| ||||||| ||| || ||||| | | Sbjct 116223 CGACATAATCACGAGCATGTCCCCAATCACGCTTAGCATCAATATTACCGAGATAAAGGC 116282 Query 47906 AGTCTTG-CTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAA 47964 | ||||| | | || | ||| | | || | |||||||| || || || ||| Sbjct 116283 ACTCTTGACGTCCCAAGTG-GATGTCCGCAACAGCACGAGTAATCTTTCGGGTAACGAAA 116341 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 || |||||| | || |||||||| || || ||||||||| |||||||| |||| | Sbjct 116342 GTACGACCACGACGAGGTGATTCATGGTTGAAGAGAATACCATTACAGGCAAACATGTTG 116401 Query 48025 TATGATTCACGATAGTT--CTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAG 48082 ||||||||||| ||||| | || ||||| || ||||| ||||| || |||||||||| Sbjct 116402 TATGATTCACGGTAGTTGACCGTA--ATCCAATAGCCATAAAGTTTGGCTACACCATAAG 116459 Query 48083 GAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAA 48142 | ||||| |||||||| ||||| || || | || || || || || |||||||| | Sbjct 116460 GGGAACGGGGATAGAAGGGTGTTGTTTCCTTTTGGGGTGTTTCAACTACTTTACCATAGA 116519 Query 48143 GTTCACTGGTGGATGCTTGATAGATACGAACCCTATC--TTCCATCTCAAGCAAACGGAC 48200 ||||| ||| || |||||||| | ||||| | ||| || | | || | ||||| Sbjct 116520 GTTCAGAGGTAGAAGCTTGATAAAAGCGAACACGATCGGTTAAACCACAGG--TACGGAT 116577 Query 48201 TGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTC 48260 || ||||| | | || ||||| | || || | ||| ||||| || | ||| || Sbjct 116578 AGCATCAAGTAAACGAAGTGTGCCAAGAGCGTCGACGTCACCGGTATATTCTGACATGTC 116637 Query 48261 AAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAA 48301 ||| || ||||| |||||| || || ||||||| |||| Sbjct 116638 AAAAGAGACCTTGACATGAGATTGAGCTGCAAGATTGTAAA 116678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665489741539200