Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq70 320 2e-82 seq251 113 5e-20 seq53 82.4 9e-11 >seq70 Length=105670 Score = 320 bits (354), Expect = 2e-82 Identities = 1120/1728 (65%), Gaps = 34/1728 (2%) Strand=Plus/Minus Query 75222 TGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACAT 75281 || ||||||| || || ||||| ||||| || || |||||| | | | ||||||| Sbjct 4705 TGATCATGCGTGTTGCGATCGGTATCCATGGAACCGATATTGATGCAGCTATTGAGACAT 4646 Query 75282 ACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTA 75341 || || ||||||| || | || | ||||| | || || || || ||||| || | Sbjct 4645 ACAACTTGATGTCCGAAAGATACTTTACACACGCTAGTCCTACTCTATTTAATGCAGGCA 4586 Query 75342 CACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACG 75401 |||| | || |||||||| ||||||| | || ||| || || || || ||| | | Sbjct 4585 CACCTCGTCCCCAGATGTCTTCTTGCTTCTTGCTCACCATGAAAGAAGATTCGATCGAAG 4526 Query 75402 GTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGA 75461 ||||||||| || || | ||||| |||||||| ||| || || |||||||| Sbjct 4525 GTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAGACAGCAGGCGGTATTGGCT 4466 Query 75462 TGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAG 75521 | |||| || | | | || | | ||| ||| || || || ||| | || Sbjct 4465 TAAACATTCACAACATTCGTGCTAGTGGATCATACATTGCCGGCACCAACGGTTACTCCA 4406 Query 75522 ATGGTATTATT-CCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCG 75580 | || ||| || || ||||| || || || ||| || || || ||||| |||||| Sbjct 4405 ACGG-ATTGTTGCCCATGCTACGTGTTTTCAACAATACGGCTCGTTATGTCGATCAAGGT 4347 Query 75581 GG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATC 75634 || ||||| ||| | |||| | ||||||||||| |||||||| || || Sbjct 4346 GGTAATAAGCGTCC---GGGCGCATTCGCAATGTACTTGGAACCTTGGCATGCAGACATT 4290 Query 75635 ATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTC 75694 | || | || || ||| ||| || | || || || | | ||||| Sbjct 4289 TTTACCTTTTTAGACTTGCGAAAAAACTTTGGCAAAGACGAAATCAGGGCTCGTGATCTG 4230 Query 75695 TTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGG 75754 || | | || |||||||| || ||||||||| |||| || || |||||| | ||| Sbjct 4229 TTCTATGCTCTCTGGATTCCTGATCTTTTCATGCAGCGTGTCAGAGACGGTGGTGATTGG 4170 Query 75755 TCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAA 75814 ||||| || ||||| | |||| || || | || |||||| ||||||| Sbjct 4169 TCTCTGTTTTGTCCCAATGAGGCTCCTGGATTACATGAAATCTGGGGTGACGAGTTTGTT 4110 Query 75815 GCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGAT 75874 || ||||| ||| || ||| || || ||||| | | || | | || | | | Sbjct 4109 GCTCTCTATGAAAAATACGAACGTGAAGGAAGAGCTAGAGAAACGAT-CAAGGCTCAAAA 4051 Query 75875 GTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAA 75933 | | ||| | || ||| | || | || |||||||| || | |||| || || || || Sbjct 4050 GCTGTGGTATGCCATTTTGGAAGCTCAAACGGAGACAGGCAATCCATTCATACTCTATAA 3991 Query 75934 GGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCT 75993 |||||||||||||| |||||||| || | || ||||| || |||||| || ||||| Sbjct 3990 GGATGCTTGTAACAGAAAGAGTAATCAGCAAAACTTGGGTACGATCAAGTGCAGCAATCT 3931 Query 75994 TTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053 || || |||||| | || ||| | | ||||| ||||| || || ||||| || Sbjct 3930 GTGTACAGAAATTGTTGAATACTCGAGTCCTGATGAAGTCGCTGTCTGTAACTTGGCCTC 3871 Query 76054 AATCGCCCTTCCAAAGTATG---TCAATGAAGAGACTCGCACTTTTGATTATGAAAAACT 76110 || || || || | |||| ||||| ||||| | | ||||| ||||||| Sbjct 3870 CATTGCTCTGCCTACCTATGTGATCAAT--AGAGA----AAAGTATGATTTCCAAAAACT 3817 Query 76111 TCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTA 76170 || || | || ||| || | || | ||| | ||| |||| || | |||| || Sbjct 3816 GCACGATGTTACCAAGGTTATCACTAGAAACTTGAACAAGATCATCGATATCAATTACTA 3757 Query 76171 TCCCGTTGAGACTGCGCGAAAG-TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTC 76229 ||| || || |||||| || || | | |||||||||| |||||||| ||||||| Sbjct 3756 TCCTGTCATCGAAGC-CGAAAGATCCAACAAGAGACACAGACCGATTGGTTTAGGTGTTC 3698 Query 76230 AAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGG 76289 |||| | || || || || || || |||| |||||| |||||||||| Sbjct 3697 AAGGCTTAGCCGACACTTTCATGGCTCTTCGTTATCCATTCGATTCACCTGAAGCCAAGC 3638 Query 76290 AGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAAT 76349 || |||| || |||||||||||||| || || || ||||||| || || || | Sbjct 3637 AGTTGAACATTCAAATCTTTGAAACCATCTACCATGCTGCCCTGGAAGCCTCCTGCGAGT 3578 Query 76350 TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGC 76409 |||||||| | || | || || || | ||| || || | |||| | || | | Sbjct 3577 TGGCTGAAAAGTATGGACCTTACGAAACCTATGAAGGCAGCCCTGTGTCCAAGGGTATCC 3518 Query 76410 TTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGACTGGGATGTTCTCAAG 76468 | || | ||| |||| |||| || | ||| | | | || ||||||| | |||||| Sbjct 3517 TGCAATATGACATGT-GGAATGTCACACCTACCAACCTCTGGGACTGGGCCGCACTCAAG 3459 Query 76469 GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 76528 ||| || || | ||| | || ||| ||| || | || || ||||| || ||| Sbjct 3458 GAAAAGATTGCTAAGCATGGTGTCCGCAACTCTCTGCTGGTTGCTCCTATGCCTACTGCC 3399 Query 76529 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 ||||| | ||||| | ||| |||||||| |||||||| |||||| | ||| ||||| Sbjct 3398 TCCACTTCTCAAATGCTCGGTTTCAATGAATGTTTTGAACCTTACACATCCAACTTCTAC 3339 Query 76589 CTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTC 76648 | | ||| ||||||| | || |||||| | || ||| || Sbjct 3338 ACCCGTCGTGTGCTCTCAGGTGAATACCAAATGGTCAACCCTTGGTTACTCCGTGATCTG 3279 Query 76649 AAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCC 76708 | || ||||||||| | | ||| ||||| | | || || | || || || Sbjct 3278 GTCGATATGGGTCTCTGGAACGATGATGTGAAGAACATGATCATGGCTGACGGAGGGTCT 3219 Query 76709 ATTCAAAATAT-CTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGA 76767 ||||| || | | ||| ||||| | | | || |||||||| || || ||||| Sbjct 3218 ATTCAGAACGTGCCCAG-CATCCCTCAAAACTTGAAAGATCTCTACAAGACTGTCTGGGA 3160 Query 76768 AATCAAGATGAAAG--ATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAA 76825 |||| | || | | ||||||||||||| || ||||||||| | ||||| ||| Sbjct 3159 AATC--TCTCAACGTACTATCATTGACATGGCTGCTGATCGTGGTGCGTATATTGACCAA 3102 Query 76826 AGTCAAAGTATGAATCTATTCATGG-AAAGTCCAACGATGTCCAAGCTCTCTTCTATGCA 76884 ||||||||| |||| | || |||| | ||||| || |||||| | |||||| Sbjct 3101 AGTCAAAGTTTGAACATCTTTATGGCTGAACCCAACTTTG-GTAAGCTCACCAGTATGCA 3043 Query 76885 TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | || | ||| || |||| | || || || ||||| || || || Sbjct 3042 CTTTTATGGCTGGCAAAAGGGATTAAAGACAGGCATGTATTACCTTCG 2995 >seq251 Length=24034 Score = 113 bits (124), Expect = 5e-20 Identities = 238/350 (68%), Gaps = 19/350 (5%) Strand=Plus/Plus Query 13556 ATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAG--------- 13606 |||||||||||||| || || ||| || ||| | | |||||||| Sbjct 13144 ATTCCCAAGTTGGAAGATGCAAACTTTGCCGGT---GTTC---CTGGAAAGAACAAGCGC 13197 Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCG-GGTCTCTC 13665 || ||||| || ||||||| |||||||| ||||| | || | ||| | || | || Sbjct 13198 TGCACTCTGATCATCACAGAAGGTGATTCAGCTAAGTCGCTTG-TTTTGAGTGGCATGTC 13256 Query 13666 TGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAA-TGTAAGAATGTTC 13724 || || |||||||| |||| ||||| ||||| | || || ||| ||| ||| |||| Sbjct 13257 AGTAGTGGGTCGTGACTACTATGGTGTATTCCCCATCCGTGGCAAACTGT-TGAACGTTC 13315 Query 13725 GGGACGCTTCGGTGGCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCC 13784 | |||| ||| || | |||| ||| | || |||| | ||||| || | Sbjct 13316 GTGACGTTTCTAATGCTGAACTCATGAAAAATGAAGAAATCAAAAACATCAAGGCTATTC 13375 Query 13785 TTGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTA 13844 |||| ||||| || || ||| | || || |||| ||| | || ||||| ||| | | Sbjct 13376 TTGGCCTTCAGCATGGTAAAAAGTATGAAAGTGTTGATGAGTTGCGATATGGCCGTTTGA 13435 Query 13845 TGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATC 13894 |||| ||||||||| ||| |||| ||||| ||||| |||||||| ||| Sbjct 13436 TGATCATGACAGATCAAGATCATGACGGTTCACACATTAAGGGTCTGATC 13485 >seq53 Length=125223 Score = 82.4 bits (90), Expect = 9e-11 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 76727 ATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAAT--CAAGATGAAAGATG 76784 || || |||||| |||| || || ||| || |||||||| || || | ||| || Sbjct 92910 ATTCCTGATGATCTCAAAAAACTATACAAGACCGTGTGGGAGATTTCACAAAGAACTATT 92969 Query 76785 TCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTAT 76844 |||||||||||||| ||| | || ||| ||||||||| |||| ||||||| ||| Sbjct 92970 --ATTGACATGGCCGCTGATAGAGGAGCCTTTATTGATCAATCTCAATCTATGAATTTAT 93027 Query 76845 TCA-TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAG 76903 | | || | | ||| || ||| | |||||||||| | || || ||||| || Sbjct 93028 TTACTGCCGAACCAAACTTTG-GCAAATTGACTTCTATGCACTTTTATGCCTGGAAGAAG 93086 Query 76904 GGGCTCAAAACCGGAATGTACTATCTCCGATC 76935 || || || || || ||||||||| | |||| Sbjct 93087 GGACTAAAGACTGGCATGTACTATTTGAGATC 93118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565424012800