Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq109 122 2e-22 >seq109 Length=78937 Score = 122 bits (134), Expect = 2e-22 Identities = 178/251 (71%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | ||||| |||| || | |||| || || ||| ||| Sbjct 18285 ATTTGCATACCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTA 18344 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||| || || | | ||| || | |||||| || ||||| || | | |||||| Sbjct 18345 TAGTCGCTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGA 18404 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || ||||| || ||||| || || ||||| ||| ||||| || ||| Sbjct 18405 TCAGGAGGAATACCTTCCTTGTCTTGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAA 18464 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TT 193362 || || ||||||| ||| || || || || || || || || ||||| |||||||| | Sbjct 18465 GATTCGACTTCTAAAGTAATTGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATGATA 18524 Query 193363 TATTAGTAAAA 193373 |||| ||||| Sbjct 18525 TATTTATAAAA 18535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899648102419200