Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq109 131 3e-25 >seq109 Length=78937 Score = 131 bits (144), Expect = 3e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 |||||||| | ||||| | || || || | ||||| || ||| || || ||||| || Sbjct 18291 ATACCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCCTTTTGA-ATGTTATAGTC 18349 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || || || |||| || | |||||||||||||||||| | | ||||||||||| Sbjct 18350 GCTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGG 18409 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || ||||| || ||||| || || | ||||||||| |||| || || ||||| Sbjct 18410 AGGAATACCTTCCTTGTCTTGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTC 18469 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||| || || ||||| | ||| || | ||| || ||||| Sbjct 18470 GACTTCTAAAGTAATTGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 18520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984472936356000