Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq70 161 3e-34 seq121 143 8e-29 seq53 109 2e-18 seq87 98.7 3e-15 seq22 98.7 3e-15 >seq70 Length=105670 Score = 161 bits (178), Expect = 3e-34 Identities = 581/899 (65%), Gaps = 15/899 (2%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| ||||| || ||||| || | |||||| || || || || | ||| || Sbjct 3909 GTATTCAACAATTTCTGTACACAGATTGCTGCACTTGATCGTACCCAAGTTTTGCTGATT 3968 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | || ||||||||||||||||| || || ||| |||| | ||||||||| | || || Sbjct 3969 ACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAATGGATTGCCTGTCTCCGTTTGAGC 4028 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGT-TGTATCTGCCTTCCG 155808 |||| ||| ||| || | | || || || | || | | ||| ||||| Sbjct 4029 TTCCAAAATGGCATACCACAGCTTTTGAGCCTTGATC-GTTTCTCTAGCTCTTCCTTCAC 4087 Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 || ||||| ||| || | | || ||||| | ||| | |||||| Sbjct 4088 GTTCGTATTTTTCATAGAGAGCAACAAACTCGTCACCCCAGATTTCATGTAATCCAGGAG 4147 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT---ACACGCTCCATAAATA 155925 || || ||| |||||||| |||||| | | |||| | ||||||| ||| || | Sbjct 4148 CCTCATTGGGACAAAACAGAGACCAA---TCACCACCGTCTCTGACACGCTGCATGAAAA 4204 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985 |||| ||| | ||||||||| || || | ||| | || || | ||| | Sbjct 4205 GATCAGGAATCCAGAGAGCATAGAACAGATCACGAGCCCTGATTTCGTCTTTGCCAAAGT 4264 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 | || || | ||||| || ||| || | ||| || |||| ||||| || | Sbjct 4265 TTTTTCGCAAGTCTAAAAAGGTAAAAATGTCTGCATGCCAAGGTTCCAAGTACATTGCGA 4324 Query 156046 AACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | || | | | || ||||| ||||| ||||| ||||| || || ||||| |||| Sbjct 4325 ATGCGCCCGGACGCTTATTACCACCTTGATCGACATAACGAGCCGTATTGTTGAAAACAC 4384 Query 156103 CTAGCATAGG-AATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 |||||| || || ||| || ||||| || ||||| ||| ||| | || ||| Sbjct 4385 GTAGCATGGGCAACAAT-CCGTTGGAGTAACCGTTGGTGCCGGCAATGTATGATCCACTA 4443 Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCAT 156221 | |||| || ||||| | || |||||||| |||| || || |||||||| || Sbjct 4444 GCACGAATGTTGTGAATGTTTAAGCCAATACCGCCTGCTGTCTTGGAGATTTGAGCACAG 4503 Query 156222 TCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCAC 156281 || | || | | |||||||| || ||||| |||| ||| | || | |||| Sbjct 4504 ATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTCTTTCATGGTGAGCAAGAAGCAA 4563 Query 156282 GAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAA 156341 ||| | || || || ||||| || || || ||||| ||||| | || || |||| Sbjct 4564 GAAGACATCTGGGGACGAGGTGTGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTAAAG 4623 Query 156342 TACTTATTAGACATATAATCGTATGTCTCCTTAATCTTC-TCAAGATTAGACCCGTGAAT 156400 || | | ||||| | | ||||||||| || || | |||| || | || || || Sbjct 4624 TATCTTTCGGACATCAAGTTGTATGTCTCAATAG-CTGCATCAATATCGGTTCCATGGAT 4682 Query 156401 ACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCG 156460 || ||| | || | ||| || |||||||||||| || ||||| || ||||| Sbjct 4683 ACCGATCGCAACACGCATGATCAAATGCTGAGGACGTTCGGCAATCTTGCCGTCAATCTT 4742 Query 156461 CAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGT 156519 |||||||| | || || |||||||| || || || | | || |||||||||| Sbjct 4743 GAGAAGGTAAGAACGCTCGAGAGTTTTGAAACCAAAGAAGTTGTACTTGAAATCACGGT 4801 >seq121 Length=74879 Score = 143 bits (158), Expect = 8e-29 Identities = 209/293 (71%), Gaps = 12/293 (4%) Strand=Plus/Minus Query 302590 AAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACA 302649 |||||||||||||||||||| ||| | ||||| |||||||||||||| ||||| || Sbjct 32211 AAACGACGCTGAATATAACCTGTTTCTGCAGTTTTGACAGCTGTATCAATAAGACCTTCA 32152 Query 302650 CGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG----CCCCCCAATAAAGGA 302705 ||||||||||||||||||||||| | || |||| | || || | || | | || Sbjct 32151 CGACCACCCATAGCATGGAAGAAGAACT----CGGTAGGAGTCAAACCTCTAAGATAAGA 32096 Query 302706 GCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGT 302765 | | || ||||||||||| ||||| | || ||||| ||||| || || || Sbjct 32095 GTTTTCGACGAAACCACGACTTTCGGGACTGTGATCATCCTTGGAGAAGTGAGGAAGAGT 32036 Query 302766 CCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGA 302825 | | || |||| || || |||||||| || |||||||| || || || | || | Sbjct 32035 ACGGAACTTGAAGCCATAAGGAATACGCTTGCCTTCAACGTTTTGTTGACCGACACAAGC 31976 Query 302826 AATCATCTGCGAAATATTTAAATCACTG--CCCTTGGAGCCAGCATTTACCAT 302876 | ||| || ||||| || ||| | | ||||| || |||||| ||||||| Sbjct 31975 AGACATTTGGGAAATGTT--AATGAAGGAACCCTTAGAACCAGCAATTACCAT 31925 Score = 107 bits (118), Expect = 6e-18 Identities = 115/148 (78%), Gaps = 7/148 (5%) Strand=Plus/Minus Query 301815 AATTTC-TTCAATACGGGGAACACCACGGGTTACGTTAG-ACTTGGACGCAACACCAGCA 301872 |||||| ||||| ||| || |||||| | |||||||| ||||| ||||||||| Sbjct 33004 AATTTCCTTCAA-ACGAGGTACACCAAGTGTTACGTTTTTACTTGAT----ACACCAGCA 32950 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||||||||||| || | ||||| | ||| ||||||||| ||| || ||||| Sbjct 32949 TAGTGGAAAGTATTCAGTGTCATCTGAGTGGCTGGTTCACCAATAGATTGAGCGGCAATA 32890 Query 301933 ATACCAACCATTTCTCCTGGTGCTACAA 301960 ||||||||||||| || || || |||| Sbjct 32889 GTACCAACCATTTCACCAGGAGCGACAA 32862 >seq53 Length=125223 Score = 109 bits (120), Expect = 2e-18 Identities = 308/464 (66%), Gaps = 13/464 (3%) Strand=Plus/Minus Query 155912 ACGCTCCATAAATACATCACTCGCCCA-AATAGCATAGAAAAGGTCCCTTGC---CTTTG 155967 ||||||||| || | |||| | |||| ||| || |||| | ||| | || | || Sbjct 91706 ACGCTCCATGAAAAGATCAGGCACCCATAATCCCA-AGAACAAGTCGCGCGCGCGCATT- 91649 Query 155968 ACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTG 156027 |||||| | || | ||||| || | || |||||||| | ||| ||| | Sbjct 91648 --TCCTCAGCACCATTGTTCTTTCGCAAGTCCAAGAATTCGAATACATCGACATGCCAAG 91591 Query 156028 GCTCCAGATACATAGCAAAACTACCATTCCTCTTGCCACC--CTGATCT-ACATACCGAG 156084 | || | ||| | |||||| |||| || | || ||||| || | | ||| | |||| Sbjct 91590 GTTCTATATAGACAGCAAAGTTACCGTTGCGTTTACCACCTCCTTGTGTCACAAAGCGAG 91531 Query 156085 CAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-G 156143 | || | ||| ||||| | ||||| ||||| || |||||||| || || || ||||| | Sbjct 91530 CGGTGTCATTAAAGACTCGGAGCATTGGAATGATGCCATTGGAGGTACCGTTTGTTCCTG 91471 Query 156144 CGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT 156203 ||| ||| || ||||| |||| || ||| | | |||| ||| || | | Sbjct 91470 CGA-TATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAGCAGAC 91412 Query 156204 TTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCC 156263 || || || |||| || | | ||||| | || ||||| ||| || |||| | Sbjct 91411 TTGGAGATACGAGCACAAGTGGTGATAGTATCATAGATGCCTTCGATACTGTCCTCTTTC 91352 Query 156264 ATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTA 156323 ||| | || |||| | |||||||||| ||||| ||||||||||| | |||| Sbjct 91351 ATTTGAACAAGGAAGCAACTAGATAATTGAGGTTTAGGTGTACCAGCGTTGAACAATGTA 91292 Query 156324 GGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGT 156367 ||||| |||||| |||| || ||| |||||| ||| || || Sbjct 91291 GGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATAGGT 91248 >seq87 Length=93468 Score = 98.7 bits (108), Expect = 3e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 || || |||||||| ||| |||||||||||| | || ||||| ||||||||| | | Sbjct 35152 GCCATCAGACCACAGATATCACACACATGGACACGATATGCATCTGATGCGTCAAACAAA 35211 Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523 || |||| ||| ||| |||| || |||||||||||||| | ||||||||||| Sbjct 35212 CGTTCCTTCAAGAATTGAGCAACACCATGGGAAATCATACAATCTCTTTCCATTTCACCA 35271 Query 251524 AAACGAAGACCACCATC 251540 ||||| | |||||||| Sbjct 35272 AAACGTAACCCACCATC 35288 >seq22 Length=202097 Score = 98.7 bits (108), Expect = 3e-15 Identities = 215/320 (67%), Gaps = 4/320 (1%) Strand=Plus/Plus Query 289026 TTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 |||||| | ||||||||||| || | ||||| | || || | ||| | | || | Sbjct 62472 TTTACCGATGGCATCAATTTCATCTACAAAAATGATGCATGGTGCATTCTTCTTGGCTGT 62531 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 |||||| || ||||||||||| || | |||| |||||| ||||||| |||||||| || Sbjct 62532 TGCAAACAAGTCTCTTACACGAGACGAACCAACACCAACGAACATTTCAACAAATTCTGA 62591 Query 289146 AGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 | | || || | ||| | ||| ||||| || ||| || | || || | ||| Sbjct 62592 ACCAGAGACACTCAAGAAGGGCACACCAGCTTCACCGGCTGTGGCTTTTGCGAGCAATGT 62651 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265 |||||||| || || || ||| || | | || || || | |||| ||| ||| Sbjct 62652 TTTACCTGTACCTGGGGGACCCGACAAAATGGCACCTTTAGGAATGGTTGCACCA--AGA 62709 Query 289266 C--TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323 | | ||| ||||| ||||||| |||| |||| ||| || ||| | || || Sbjct 62710 CGTTCATAAGCAGCAGGGTTCTTTAAGAATTTGACAAACTCCATAATTTCTTCCTTGGCT 62769 Query 289324 TCATCACATCCTGCTACATC 289343 ||||| ||| || ||||| Sbjct 62770 TCATCTGCTCCAGCAACATC 62789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471807039708720