Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq70 178 1e-39 seq109 147 2e-30 seq91 107 2e-18 seq53 104 2e-17 seq11 104 2e-17 seq165 102 7e-17 >seq70 Length=105670 Score = 178 bits (196), Expect = 1e-39 Identities = 1189/1886 (63%), Gaps = 79/1886 (4%) Strand=Plus/Plus Query 138156 ATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGT 138215 ||||||||| ||||| |||||||| | || || || | || |||||||| || || Sbjct 2955 ATCTACAGTGAACTTGATGGCATCGACAGCAGGACGTGTACGAAGGTAATACATGCCTGT 3014 Query 138216 TTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCGGTT 138274 ||||| || |||| |||| | || | ||| || ||||| | || |||| || | Sbjct 3015 CTTTAATCCCTTTTGCCAGCCATAAAAGTGCATACTGGTGAGCTTACCA--AAGTTGGGT 3072 Query 138275 TC-GCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333 || |||| ||| ||||| || |||||| || || || | || || |||||| ||| Sbjct 3073 TCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATATACGCACCACGATCAGCAGCC 3132 Query 138334 ATGTTAATTAAATTTTTACTTTTC---ATCTCCCACACGGTCTTGTATAGATCACGAATA 138390 |||| ||| | | | || || || ||||| || |||||||| ||||| | Sbjct 3133 ATGTCAATGATAGT---ACGTTGAGAGATTTCCCAGACAGTCTTGTAGAGATCTTTCAAG 3189 Query 138391 TGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTC 138450 | | | || || | | | || ||||| ||| | | || ||||| || || Sbjct 3190 TTTTGAGGGATGCTGGGCACGTTCTGAATAGACCCTCCGTCAGCCATGATCATGTTCTTC 3249 Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACC 138510 | |||||||| | ||| || | || || || | | | ||| | | Sbjct 3250 ACATCATCGTTCCAGAGACCCATATCGACCAGATCACGGAGTAACCAAGGGTTGACCATT 3309 Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570 || ||||||| | | || ||||| ||| | |||| ||| |||| ||||| || Sbjct 3310 TGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGTTGGATGTGTAAGGTTCAAAACAT 3369 Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630 || ||| || || || |||| |||| || || ||||| || |||| ||||| Sbjct 3370 TCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATAGGAGCAACCAGCAGAGAG 3429 Query 138631 TTCCGTAAACCGTGA--AGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGC 138688 || || | ||| || ||| || ||||||||| | | ||||||||| | | | Sbjct 3430 TTGCGGACACCATGCTTAGCAATCTT--TTCCTTGAGTGCGGCCCAGTCCCAGAGGTTGG 3487 Query 138689 TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTG----CGGGACTGCCT 138744 ||||| | |||||||| || || || | || ||| ||| | || |||||| Sbjct 3488 TAGGTGTGACATTCCACATGTCATATTGCAGGATACCC----TTGGACACAGGGCTGCCT 3543 Query 138745 TCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCA 138804 || || | ||||| ||| ||| || ||||||||| | || || || ||| || Sbjct 3544 TCATAGGTTTCGTAAGGTCCATACTTTTCAGCCAACTCGCAGGAGGCTTCCAGGGCAGCA 3603 Query 138805 TAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCG---GGCCTCGGCGCTCTCGTAC 138861 | ||| || ||||| || || | || ||| | ||| || | ||| | Sbjct 3604 TGGTAGATGGTTTCAAAGATTTG---AATGTTCAACTGCTTGGCTTCAGGTGAATCGAAT 3660 Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921 || || || | |||| | |||||| | ||||| || || | || | || | Sbjct 3661 GGATAACGAAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACACCTAAACCAATCGGTCTG 3720 Query 138922 TGGCGCAGATTTGACGCTTTTGCGGCTTCGAT---AGGATAATAGTTTACATCGATGATT 138978 || | | || || |||| |||||||||| |||||| || || | ||||||||| Sbjct 3721 TGTCTCTTGTTGGAT-CTTT--CGGCTTCGATGACAGGATAGTAATTGATATCGATGATC 3777 Query 138979 TTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTG 139038 ||||| || |||| || ||||| || || | | | || ||||| || Sbjct 3778 TTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGGAAATCATAC--- 3834 Query 139039 CCCCCGTTGTCGTCGACGACGTCGA-CAAATTTGTTGACACA--AATCGAGGCTATGTTG 139095 || || || | | || || || || | || | ||| ||||| | ||| Sbjct 3835 ------TTTTC-TCTA-----TTGATCACATAGGTAGGCAGAGCAATGGAGGCCAAGTTA 3882 Query 139096 CACACCGCCACTTCGTCGGGG-TCGCTGTATTCGACAATTTCGGCACACAAATTACTACA 139154 || || || ||||| || || ||| |||||| |||||||| | ||||| ||| || || Sbjct 3883 CAGACAGCGACTTCATCAGGACTCGA-GTATTCAACAATTTCTGTACACAGATTGCTGCA 3941 Query 139155 CTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCAT 139214 |||||||||||| || ||||| ||||| || |||| |||||||||||| || || || || Sbjct 3942 CTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTAT 4001 Query 139215 ATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA-----AGTCCCTA 139269 | || |||| || ||| ||| | || | |||| | ||| | ||| Sbjct 4002 GAATGGATTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGCCTT 4061 Query 139270 GCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA- 139328 | | || | | || | | | || || ||||| ||||| ||||| | | || Sbjct 4062 GATCGTTTCTCTAGCTC-----TTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAAC 4116 Query 139329 TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATAC 139388 ||| ||||| || ||| | | || || | ||||| | || ||||| | Sbjct 4117 TCG-TCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGACCAATC 4175 Query 139389 GCCGTTCGCCT-TGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAAT 139447 || || || |||| ||| |||||| ||||| |||||||| | ||| | | || || Sbjct 4176 ACC-ACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGAACAGAT 4234 Query 139448 CGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGT 139507 | || ||| | | || || || | ||| | || || | || ||||| || Sbjct 4235 CACGAGCCCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGTAAAAATGT 4294 Query 139508 CAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGAT 139564 | || ||||| ||||||| || || || | |||||| || || |||||||||| Sbjct 4295 CTGCATGCCAAGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCACCTTGAT 4354 Query 139565 CGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTC 139624 |||| | || | | ||| ||||| || || | ||| ||| || ||| | | | Sbjct 4355 CGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAATCCGTTGGAGTAAC 4414 Query 139625 CGTTGGTGCTACGGATGGGACTGTT--GCGAGCTCGGACGTCATGTACATTGATGCCGAT 139682 ||||||||| ||| | || | | ||| || | || || | || | ||| || Sbjct 4415 CGTTGGTGC--CGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAAGCCAAT 4472 Query 139683 TCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTTA 139741 ||||| | ||||| ||| | | || || | | ||||| || |||||| | Sbjct 4473 ACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTG-AGCGTCTCATAGATACCTTCGA 4531 Query 139742 TGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGG 139801 | || || | ||| |||| || ||||| || || | || || | ||||| | Sbjct 4532 TCGAATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTG 4591 Query 139802 CTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTC-GACATCAATTCGTACGTT 139860 | ||| ||||||||||| ||||| || || | | |||| |||||||| | ||| || Sbjct 4592 CATTAAATAGAGTAGGACTAGCGTGTGT-AAAGTATCTTTCGGACATCAAGTTGTATGTC 4650 Query 139861 TCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGT 139920 || || || ||||||| |||| |||||||||| | || ||||| | || ||| Sbjct 4651 TCAATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGC 4710 Query 139921 TGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTG 139980 || |||||||| | | ||| || || || || ||| ||| || || ||| Sbjct 4711 TGAGGACGTTCGGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGAGTTTTG 4770 Query 139981 TAGCCAAAGTACCTATAGTTGAAATC 140006 | |||||| | | || |||||||| Sbjct 4771 AAACCAAAGAAGTTGTACTTGAAATC 4796 >seq109 Length=78937 Score = 147 bits (162), Expect = 2e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || || || ||||| | ||||| ||| | | Sbjct 18520 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTCGAATCTTCT 18461 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | |||||||||||||| |||||||| ||||| || ||||| |||||| Sbjct 18460 GACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 18401 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||| || ||||| || || ||| | | | | || |||||| Sbjct 18400 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAAC 18341 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||||||||| || || |||||||| Sbjct 18340 ATTCAAAAGGAATCTACTCTTCACTTGGT 18312 >seq91 Length=92626 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||||||||| || ||||| || ||||| |||||||||||| | || || Sbjct 70113 GTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAACAACGTCTCATTTTC 70054 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| ||||| || || || | | | || ||||| ||||||||||||||||| Sbjct 70053 GCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAACATTCAAAAGGAATCT 69994 Query 24899 ACACTACACTTGGT 24912 || || |||||||| Sbjct 69993 ACCCTTCACTTGGT 69980 >seq53 Length=125223 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138168 CTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGTTTTTAACCCATT 138227 ||| || |||||| | || ||| | | ||||| ||| ||||| || || |||| || || Sbjct 93143 CTTGATTGCATCAACTGCAGGTCTAGATCTCAAATAGTACATGCCAGTCTTTAGTCCCTT 93084 Query 138228 TTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGTTTCGCCAG-AAATA 138286 | |||||| || | ||| || ||||| | | || |||| | |||| ||| ||||| Sbjct 93083 CTTCCAGGCATAAAAGTGCATAGAAGTCAATTT-GCCAAAGTTTGGTTCGGCAGTAAATA 93025 Query 138287 TGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAAT 138346 || | |||||| ||||| || || || |||| |||| |||||||| ||| | | Sbjct 93024 AATTCATAGATTGAGATTGATCAATAAAGGCTCCTCTATCAGCGGCCATGTCAATAATAG 92965 Query 138347 TTTTACTTTTCATCTCCCACACGGTCTTGTATAG 138380 || | | ||||||||||||||||||||||| Sbjct 92964 TTCTTTGTGAAATCTCCCACACGGTCTTGTATAG 92931 >seq11 Length=236632 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 24773 GAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTG 24832 |||| || || ||||||||||||||||| ||||| || ||||| |||||||||||| | Sbjct 25 GAAAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCTCCTGATCAACAACGTCTC 84 Query 24833 ATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAG 24892 || || ||||| || ||||| || ||| | | || ||||| ||||| ||||| Sbjct 85 ATTTTCGCCGGCAAGCAGCTCGAAGATGGTCGTACTTTGAGTGATTACAACATCCAAAAA 144 Query 24893 GAATCGACACTACACTTGGT 24912 ||||| || || |||||||| Sbjct 145 GAATCTACTCTTCACTTGGT 164 >seq165 Length=49949 Score = 102 bits (112), Expect = 7e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||||| | || | || || |||||||| |||||||| ||||| || ||||| || | Sbjct 37996 CCGACACCATTGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACC 37937 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 |||||||| | ||||||||||| ||||| || || || | | | || || || | Sbjct 37936 AACAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGCGACTACA 37877 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||| ||||||||||| || || ||||| || Sbjct 37876 ACATCCAAAAGGAATCTACTCTCCACTTAGT 37846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894450716800