Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq258 136 6e-26 seq97 127 3e-23 seq70 122 1e-21 seq106 118 2e-20 >seq258 Length=22759 Score = 136 bits (150), Expect = 6e-26 Identities = 177/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || |||||||||||| |||| ||||| || | | Sbjct 4965 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACGGCGTGCTTGGCGAGTTCACCAGGAA 4906 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || || || ||||| || || || || | ||| ||| |||||||| || Sbjct 4905 GGATGAGACGAACAGCGGTTTGAATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAG 4847 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || || | || || || | || |||||||| || |||||| Sbjct 4846 GCAGCCAACTTGGAGGCTTCAGTAGCAATACGTTCAAAGATATCGTTGACGAAGGAGTTC 4787 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || |||||||| || ||||| | |||||| Sbjct 4786 AAGATGGACATGGCCTTGTTGGAGATACCAGTATCGGGGTGGACTTGCTTCAAGACCTTG 4727 Query 1485709 TA 1485710 || Sbjct 4726 TA 4725 >seq97 Length=86107 Score = 127 bits (140), Expect = 3e-23 Identities = 184/257 (72%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || ||||| |||||| |||| ||||| || | | Sbjct 19077 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACAGCGTGCTTGGCGAGTTCACCAGGAA 19136 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || || || || || || || || | ||| ||| |||||||| || Sbjct 19137 GAATGAGACGAACAGCAGTTTGAATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAA 19195 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || ||| | || || || | || || |||||||| |||||| Sbjct 19196 GCAGCCAATTTGGAGGCTTCAGTGGCAATACGTTCAAAGATATCATTGACAAAAGAGTTC 19255 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || || ||||| || ||||| | |||||| Sbjct 19256 AAGATGGACATGGCCTTGTTGGAGATACCAGTATCAGGGTGAACTTGCTTCAAGACCTTG 19315 Query 1485709 TAAACAAAGGACGAGTA 1485725 || | | | || ||||| Sbjct 19316 TAGATATAAGAAGAGTA 19332 >seq70 Length=105670 Score = 122 bits (134), Expect = 1e-21 Identities = 181/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || |||||||| || ||||| | ||| || || || |||||||||| | |||||||| Sbjct 4351 TGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAATCCGTTGGAG 4410 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | ||||||||||| || | ||| | || || || | ||||| | ||||| Sbjct 4411 TAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAAGCCA 4470 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || ||||| || | ||||||||| | || || |||| |||||||| ||||| || ||| Sbjct 4471 ATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCG 4530 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 ||||| || | |||||| | || ||||| || || | || || || | ||||| Sbjct 4531 ATCGAATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCT 4590 Query 2073781 GCATTGAAGAGCGTGGG 2073797 ||||| || || || || Sbjct 4591 GCATTAAATAGAGTAGG 4607 >seq106 Length=79482 Score = 118 bits (130), Expect = 2e-20 Identities = 228/335 (68%), Gaps = 16/335 (5%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 |||||| || |||| ||||||||| ||||| || | |||||||| | || || || Sbjct 37412 ACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAAACCACGTTT 37471 Query 794400 CTTGAGCCAAAAGATG---GCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 |||||||||||||||| ||| || || || ||||| ||||| || ||||| || || Sbjct 37472 CTTGAGCCAAAAGATGGAAGCAAAGGAA---CCAGAGAAGAAGATACCTTCGACAGCAGC 37528 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTG--ATCCACTTCATC 794514 |||| | || || ||||| |||| ||| | |||| | |||||||| | Sbjct 37529 AAAGGCAACAAGGCGCTCAGCAA--------AGGAACCGTTTGAGGAAATCCACTTGAAG 37580 Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC 794574 ||||| || |||||| || | | | || | ||||| || || |||||| || Sbjct 37581 GCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCT 37640 Query 794575 TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634 ||||| || |||| || ||||| || | || ||| || |||| ||| ||| Sbjct 37641 TTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATG 37700 Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAGCAGTT 794669 ||||| || ||| || |||||||| || || || Sbjct 37701 TTTTCAATCATGATTTGAAAGCCATAGAAACATTT 37735 Score = 93.3 bits (102), Expect = 7e-13 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 793926 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCC 793985 || || |||||||||||||| | ||| ||||||| ||||| | || || || | Sbjct 37125 TCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATGTCCATAAAGTCAAATGGATTAGTA 37184 Query 793986 GTCAGGTAGTGCTTCTCGCACCC--GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | || ||| ||| ||| |||| |||| || || | || || || || |||||||||| Sbjct 37185 GCCATGTAAATCTTGTCGAACCCAAGAGCAAC-CATG-AGACGATCAGCAACGAATTCAA 37242 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGA 794103 |||| || ||||| | ||| | |||||||| ||||| || ||||| || | || | | Sbjct 37243 TGTATTGACACATCAAGGCAGAATTCATGCCAATGAGAGCAACGGGAAGAGCATCCGTCA 37302 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 ||| |||| || || ||| || || | |||||| Sbjct 37303 AAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGAT 37339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916186830245840