Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq109 111 1e-19 >seq109 Length=78937 Score = 111 bits (122), Expect = 1e-19 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || ||||| |||||||||||||| |||| | || |||| Sbjct 18309 AGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCT 18368 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||| || ||||| || || | || | || |||||||| Sbjct 18369 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 18428 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || |||||||| || || | ||||| ||| | ||||| || | || || Sbjct 18429 TGAATCTTTTGTTTTAC--AT--TGTCGATAGTGTCAGAAGATTCGACTTCTAAAGTAAT 18484 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATA 34981 |||||||| || || ||||| |||||||| ||||||||| Sbjct 18485 TGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATGATA 18524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690577146640