Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq59 102 1e-16 seq87 86.0 8e-12 >seq59 Length=120760 Score = 102 bits (112), Expect = 1e-16 Identities = 178/259 (69%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 168526 AAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 168585 ||||||| | ||| | |||||||| || | ||||| || ||| ||| | | | Sbjct 9105 AAGAACTGCTTTGGTTCATAAAAGGAGATACAAACTCAAAGCATCTAAGTGAAAGAAATA 9046 Query 168586 TTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAA 168645 | ||| ||||| | | || |||||||| |||| | | || | ||| |||| | Sbjct 9045 TCAAAATTTGGGATGGCAACGGTTCTCGCGAATATCTCGACAAGTTAGGTCTTACTCACC 8986 Query 168646 GAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAAT 168705 | |||||||| | || ||| |||| ||||||||||||||||| || || | | Sbjct 8985 GTCGTGAAGGTGACCTTGGACCAGTTTACGGATTTCAATGGAGACACTTTGGCGCCAAGT 8926 Query 168706 ATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAACTATAA 168765 | |||||||||| || ||||| || |||||||| || || |||||| ||| || Sbjct 8925 ACGTTGACTGTGACACTGATTATACAGGACAAGGCGTTGATCAATTACAACAAGTGATTG 8866 Query 168766 ATACTTTACACAACAATCC 168784 ||||| || | |||||||| Sbjct 8865 ATACTATAAAAAACAATCC 8847 >seq87 Length=93468 Score = 86.0 bits (94), Expect = 8e-12 Identities = 179/263 (68%), Gaps = 14/263 (5%) Strand=Plus/Minus Query 193742 TGGGTCTGAAACAATGTATTGTGGGTTTACTGGTAAAAGAATTGAAAATAAAATTTTTAT 193801 ||||| |||| |||||| ||| ||||||||| | | |||| || | || | Sbjct 35460 TGGGTTTGAAGTCATGTATAATGGTTTTACTGGTCGTA-AGCTGAATGCTCAAGTATTCT 35402 Query 193802 AGGG-CCAACTTATTATCATCGTCTTAAACATATGGTTAAGGATAAAATGCAT------G 193854 ||| ||||| |||||||| ||| | ||||| ||||| | ||||| || || | Sbjct 35401 TGGGTCCAACCTATTATCAGCGTTTGAAACACATGGTAGACGATAAGATTCACAGTCGAG 35342 Query 193855 CTAGAAGTCATGGACAAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAG 193914 | ||| | | || ||| | ||| ||| |||||||| | |||||||| || Sbjct 35341 CAAGAGGACCTGTACAGAT-----CTTGACAA-GACAACCAGTTGAAGGTCGTTCAAGAG 35288 Query 193915 GTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTACTC 193974 ||| || ||| | ||||| |||||||| | ||| ||||| | ||||||| | ||| Sbjct 35287 ATGGTGGGTTACGTTTTGGTGAAATGGAAAGAGATTGTATGATTTCCCATGGTGTTGCTC 35228 Query 193975 AATTCTTGAATGAAAGAATGTTT 193997 |||||||||| ||| | ||||| Sbjct 35227 AATTCTTGAAGGAACGTTTGTTT 35205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635173153756800