Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq11 100 3e-16 seq91 86.0 6e-12 >seq11 Length=236632 Score = 100 bits (110), Expect = 3e-16 Identities = 97/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || ||||| || || |||||||| | || || ||| | || |||||||||||||| Sbjct 152 GTAGATTCTTTTTGGATGTTGTAATCACTCAAAGTACGACCA-TCTTCGAGCTGCTTGCC 94 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| || || || || |||||||| ||||||||||| |||||||||||| Sbjct 93 GGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTGTCTTGGATCTTTTGCTT 34 Query 133583 GA 133584 || Sbjct 33 GA 32 >seq91 Length=92626 Score = 86.0 bits (94), Expect = 6e-12 Identities = 109/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||| || || || || || |||||||| | || || |||| ||| |||| Sbjct 69983 AAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGT--ACGACCGTCTTCGA 70040 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| ||||||| || || || || |||||||| |||||||| || || Sbjct 70041 GTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGA 70100 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTC 133600 |||||||||||| | |||| ||||| Sbjct 70101 TCTTTTGCTTGACATTGTCAATGGTGTC 70128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417416054400