Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq109 134 1e-26 seq165 107 2e-18 seq91 98.7 1e-15 >seq109 Length=78937 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || || ||||||||||||||||| ||||||| Sbjct 18294 CCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTT 18353 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || ||||| ||||| || ||||| || | ||| || ||||| || || Sbjct 18354 AGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGA 18413 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||| |||||||| || ||| | ||||| || ||||| || Sbjct 18414 ATACCTTCCTTGTCTTGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCGACT 18473 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||| || || || || | || || || || |||||||| Sbjct 18474 TCTAAAGTAATTGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 18520 >seq165 Length=49949 Score = 107 bits (118), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| ||||||||||||| | ||| || ||| ||||| || Sbjct 37851 GTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCGAGTTG 37910 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||| || | ||| || || || || || || ||||| || |||||||| || Sbjct 37911 TTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTT 37970 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGA 134656 ||| ||||| ||| | |||||||| Sbjct 37971 TTGCTTGACGTTGTCAATGGTGTCGGA 37997 >seq91 Length=92626 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||||||||||||||| || | | ||| || ||| ||||| || Sbjct 69985 GTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGAGTTG 70044 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || ||||| | ||| || ||||| || || || ||||| || ||||| || || Sbjct 70045 TTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTT 70104 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGA 134656 ||| ||||| ||| | ||||| || Sbjct 70105 TTGCTTGACATTGTCAATGGTGTCAGA 70131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505394862211200