Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq60 140 5e-28 >seq60 Length=120286 Score = 140 bits (154), Expect = 5e-28 Identities = 256/373 (69%), Gaps = 4/373 (1%) Strand=Plus/Minus Query 161291 GGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTA 161350 ||| | || ||| | || || | || || || || ||| ||| | ||||| ||| Sbjct 116565 GGTTTAACCGATCGTGTTCGCTTTTATCAAGCTTCTACCTCTGAACTCTATGGTAAAGTA 116506 Query 161351 CAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCT 161410 || ||||| || || ||||||||||| ||||| || || || || ||||| ||||| Sbjct 116505 GTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGCC 116446 Query 161411 AAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGT 161470 ||||| ||||| ||||||||| |||||| | || || ||| ||| || Sbjct 116445 AAACTTTATGGCTATTGGATTACGGTCAACTACCGTGAATCATACAACATGTTTGCCTGT 116386 Query 161471 AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAG 161530 | ||||||||| ||||||||||| ||||| || || ||| |||||||| ||||| ||| Sbjct 116385 AATGGTATTCTCTTCAACCATGAATCACCTCGTCGTGGTCGTACTTTCGTTACCCGAAAG 116326 Query 161531 ATTACTAGGGGACTATCCCGTATTAGTAC--AGGACTACAGGATTGTCTATACCTAGGTA 161588 |||||| | | || | || | || |||| || || || || || || |||| Sbjct 116325 ATTACTCGTG--CTGTTGCGGACATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTA 116268 Query 161589 ATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGA 161648 || | | | | || |||||||| |||||| || ||||| || | ||||||| | | Sbjct 116267 ATATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCA 116208 Query 161649 TGTTACAACAGGA 161661 || | || || || Sbjct 116207 TGCTGCAGCAAGA 116195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729924490492800