Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq22 98.7 2e-15 >seq22 Length=202097 Score = 98.7 bits (108), Expect = 2e-15 Identities = 188/275 (68%), Gaps = 9/275 (3%) Strand=Plus/Plus Query 332025 AAACGACGAGTTAATGCACTATCTTTCTCGATATTTTTACGATATTCATCATATGTTGTT 332084 |||||||| |||||| |||||| || || || ||| |||||| | |||||| Sbjct 190163 AAACGACGCTCGAATGCAGGATCTTTTTCAAT---TTCACGGTATTCAGTAAGTGTTGTA 190219 Query 332085 GCACCAATTACACGAATCTCACCACGTGAAAGTGCTGGCTTAAGCATATTGCTCATGTCC 332144 || ||||| || | |||||||| | || || || |||| |||| |||| Sbjct 190220 GCGCCAATGCATCGCAATTCACCACGAGCCAGCATAGGTTTCAGCAGATTGGCAGCGTCC 190279 Query 332145 ATAGAACCATTACTTGCGGAACCAGCCCCAACCATAATATGAATTTCATCAATGAAAACA 332204 |||||||| | || | ||| || |||| | | | || ||||||||||| || | | Sbjct 190280 ATAGAACCCTCACCTTT---ACCGGCACCAAGAACAGTGTGGATTTCATCAATAAACAAA 190336 Query 332205 ATAGTA---TTTTCACGTTTCTTTAGTTCTTTTAGCAAATTGTCGATGCGTTCTTCAAAT 332261 || || | |||| || ||| | |||||| | | | | || |||||||||||| Sbjct 190337 ATGATACCCTCTTCAGATTCCTTGACTTCTTTCAAGACAGCCTTGAGACGTTCTTCAAAT 190396 Query 332262 TCACCACGATACTTAGTACCAGCAGTCAATGCACC 332296 |||||||||||||| | ||||||| | || || || Sbjct 190397 TCACCACGATACTTGGCACCAGCAATTAAGGCGCC 190431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113822408266880